ECOD: domain e4ogcA2

Domain ID e4ogcA2

A: mixed a+b and a/b
X: Ribonuclease H-like
H: Ribonuclease H-like
T: Ribonuclease H-like
F: RuvC_III

UID:	001144782
Type:	Manual and representative domain
Range:	A:8-49,A:468-513,A:674-822
Ligands:	MN SPD
PDB:	4ogc
PDB Description:	HNH ENDONUCLEASE DOMAIN PROTEIN
UniProt:	J3F2B0
Species:

Domains in the same chain:

Download Pymol

e4ogcA2	A:8-49,A:468-513,A:674-822	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4ogcA1	A:253-467	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4ogcA3	A:514-673	His-Me finger endonucleases	His-Me finger endonucleases	His-Me finger endonucleases
e4ogcA6	A:823-923	CRISPR-associated endonuclease Cas9 beta-hairpin domain	CRISPR-associated endonuclease Cas9 beta-hairpin domain	CRISPR-associated endonuclease Cas9 beta-hairpin domain
e4ogcA4	A:924-995	SSHS domain	SSHS domain in CRISPR-associated endonuclease Cas9	SSHS domain in CRISPR-associated endonuclease Cas9
e4ogcA5	A:996-1101	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain

Domains in the same PDB:

e4ogcA2	A:8-49,A:468-513,A:674-822	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4ogcA1	A:253-467	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4ogcA3	A:514-673	His-Me finger endonucleases	His-Me finger endonucleases	His-Me finger endonucleases
e4ogcA6	A:823-923	CRISPR-associated endonuclease Cas9 beta-hairpin domain	CRISPR-associated endonuclease Cas9 beta-hairpin domain	CRISPR-associated endonuclease Cas9 beta-hairpin domain
e4ogcA4	A:924-995	SSHS domain	SSHS domain in CRISPR-associated endonuclease Cas9	SSHS domain in CRISPR-associated endonuclease Cas9
e4ogcA5	A:996-1101	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain

Structural contacts of domain e4ogcA2 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ogcA6	A:x,y,z->A:X,Y,Z-1	CRISPR-associated endonuclease Cas9 beta-hairpin domain	Interaction Interface Pymol