Domain ID e4ogqE1

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  • A: extended segments
  • X: PetL subunit of the cytochrome b6f complex
  • H: PetL subunit of the cytochrome b6f complex
  • T: PetL subunit of the cytochrome b6f complex
  • F: PetL
UID: 001291704
Type: Automatic domain
Parent: e1q90L1
Range: E:1-31
Ligands: 1O2 3WM 7PH UMQ
PDB: 4ogq
PDB Description: Cytochrome b6-f complex subunit 6
UniProt: Q8YVQ2
Species: Nostoc sp. PCC 7120

Structure of domain e4ogqE1

Domains in the same chain:

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e4ogqE1 E:1-31 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex

Domains in the same PDB:

e4ogqA1 A:2-215 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e4ogqB1 B:2-160 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e4ogqC2 C:1-169,C:232-250 Immunoglobulin-like beta-sandwich Immunoglobulin-related Common fold of diphtheria toxin/transcription factors/cytochrome f
e4ogqC1 C:170-231 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e4ogqC3 C:251-289 Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor
e4ogqD1 D:9-47 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e4ogqD3 D:48-92,D:132-179 ISP domain ISP domain ISP domain
e4ogqD2 D:93-131 Trm112p-like Trm112p-like Trm112p-like
e4ogqE1 E:1-31 PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex PetL subunit of the cytochrome b6f complex
e4ogqF1 F:1-32 PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex PetM subunit of the cytochrome b6f complex
e4ogqG1 G:1-37 PetG subunit of the cytochrome b6f complex PetG subunit of the cytochrome b6f complex PetG subunit of the cytochrome b6f complex
e4ogqH1 H:1-29 PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex PetN subunit of the cytochrome b6f complex

Structural contacts of domain e4ogqE1 of H-group "PetL subunit of the cytochrome b6f complex":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ogqH1 E:X,Y,Z->H:x,y,z PetN subunit of the cytochrome b6f complex Interaction Interface Pymol
e4ogqF1 E:X,Y,Z->F:x,y,z PetM subunit of the cytochrome b6f complex Interaction Interface Pymol
e4ogqC3 E:x,y,z->C:X,Y,Z Cytochrome f subunit of the cytochrome b6f complex, transmembrane anchor Interaction Interface Pymol
e4ogqD1 E:x,y,z->D:X,Y,Z iron-sulfur subunit (ISP) transmembrane anchor Interaction Interface Pymol