ECOD: domain e4ogrB1

Domain ID e4ogrB1

A: alpha arrays
X: HTH
H: HTH
T: Cyclin-like
F: CycT2-like_C

UID:	001289252
Type:	Automatic domain
Parent:	e2ivxA2
Range:	B:151-261
Ligands:	ZN
PDB:	4ogr
PDB Description:	Cyclin-T1
UniProt:	O60563
Hsap BLAST neighbor:	O60563
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4ogrB1

Domains in the same chain:

Download Pymol

e4ogrB2	B:7-150	HTH	HTH	Cyclin-like
e4ogrB1	B:151-261	HTH	HTH	Cyclin-like

Domains in the same PDB:

e4ogrA1	A:8-330	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4ogrB2	B:7-150	HTH	HTH	Cyclin-like
e4ogrB1	B:151-261	HTH	HTH	Cyclin-like
e4ogrD1	D:0-49	HIV-1 Tat	HIV-1 Tat	HIV-1 Tat
e4ogrE1	E:8-330	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4ogrF2	F:7-150	HTH	HTH	Cyclin-like
e4ogrF1	F:151-261	HTH	HTH	Cyclin-like
e4ogrH1	H:0-49	HIV-1 Tat	HIV-1 Tat	HIV-1 Tat
e4ogrI1	I:8-330	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase
e4ogrK2	K:7-150	HTH	HTH	Cyclin-like
e4ogrK1	K:151-261	HTH	HTH	Cyclin-like
e4ogrM1	M:0-49	HIV-1 Tat	HIV-1 Tat	HIV-1 Tat

Structural contacts of domain e4ogrB1 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4ogrD1	B:X,Y,Z->D:x,y,z	HIV-1 Tat	Interaction Interface Pymol
e4ogrA1	B:X-Y,X,Z-1/6->A:x,y,z	Protein kinase/SAICAR synthase/ATP-grasp	Interaction Interface Pymol
e4ogrB1	B:x,y,z->B:-Y,-X,-Z+1/6	HTH	Interaction Interface Pymol
e4ogrB1	B:-Y,-X,-Z+1/6->B:x,y,z	HTH	Interaction Interface Pymol
e4ogrD1	B:-Y,-X,-Z+1/6->D:x,y,z	HIV-1 Tat	Interaction Interface Pymol