| UID: | 001289250 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4bkyA1 |
| Range: | E:8-330 |
| Ligands: | ADN |
| PDB: | 4ogr |
| PDB Description: | Cyclin-dependent kinase 9 |
| UniProt: | P50750 |
| Hsap BLAST neighbor: | P50750 |
| Species: | Homo sapiens |
Structure of domain e4ogrE1
Domains in the same chain:
| e4ogrE1 | E:8-330 | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase |
Domains in the same PDB:
| e4ogrA1 | A:8-330 | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase |
| e4ogrB2 | B:7-150 | HTH | HTH | Cyclin-like |
| e4ogrB1 | B:151-261 | HTH | HTH | Cyclin-like |
| e4ogrD1 | D:0-49 | HIV-1 Tat | HIV-1 Tat | HIV-1 Tat |
| e4ogrE1 | E:8-330 | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase |
| e4ogrF2 | F:7-150 | HTH | HTH | Cyclin-like |
| e4ogrF1 | F:151-261 | HTH | HTH | Cyclin-like |
| e4ogrH1 | H:0-49 | HIV-1 Tat | HIV-1 Tat | HIV-1 Tat |
| e4ogrI1 | I:8-330 | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase/SAICAR synthase/ATP-grasp | Protein kinase |
| e4ogrK2 | K:7-150 | HTH | HTH | Cyclin-like |
| e4ogrK1 | K:151-261 | HTH | HTH | Cyclin-like |
| e4ogrM1 | M:0-49 | HIV-1 Tat | HIV-1 Tat | HIV-1 Tat |
Structural contacts of domain e4ogrE1 of H-group "Protein kinase/SAICAR synthase/ATP-grasp":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4ogrF2 | E:X,Y,Z->F:x,y,z | HTH | Interaction Interface Pymol |
| e4ogrE1 | E:x,y,z->E:X,X-Y-1,-Z-1/6 | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e4ogrE1 | E:X,X-Y-1,-Z-1/6->E:x,y,z | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e4ogrA1 | E:x,y,z->A:X,Y,Z | Protein kinase/SAICAR synthase/ATP-grasp | Interaction Interface Pymol |
| e4ogrH1 | E:X,Y,Z->H:x,y,z | HIV-1 Tat | Interaction Interface Pymol |
| e4ogrF2 | E:X-Y,-Y,-Z->F:x,y,z | HTH | Interaction Interface Pymol |
