ECOD: domain e4oo8A1

Domain ID e4oo8A1

A: few secondary structure elements
X: His-Me finger endonucleases
H: His-Me finger endonucleases
T: His-Me finger endonucleases
F: HNH_4

UID:	001711206
Type:	Automatic domain
Parent:	e4un3B4
Range:	A:766-923
PDB:	4oo8
PDB Description:	CRISPR-associated endonuclease Cas9/Csn1
UniProt:	Q99ZW2
Species:

Domains in the same chain:

Download Pymol

e4oo8A4	A:3-57,A:719-765,A:924-1102	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4oo8A5	A:58-713	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8A1	A:766-923	His-Me finger endonucleases	His-Me finger endonucleases	His-Me finger endonucleases
e4oo8A2	A:1103-1199	SSHS domain	SSHS domain in CRISPR-associated endonuclease Cas9	SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8A3	A:1200-1366	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain

Domains in the same PDB:

e4oo8A4	A:3-57,A:719-765,A:924-1102	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4oo8A5	A:58-713	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8A1	A:766-923	His-Me finger endonucleases	His-Me finger endonucleases	His-Me finger endonucleases
e4oo8A2	A:1103-1199	SSHS domain	SSHS domain in CRISPR-associated endonuclease Cas9	SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8A3	A:1200-1366	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain
e4oo8D1	D:3-57,D:714-765,D:919-1012,D:1038-1100	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4oo8D2	D:58-713	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe	CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8D3	D:1101-1200	SSHS domain	SSHS domain in CRISPR-associated endonuclease Cas9	SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8D4	D:1201-1366	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain	CRISPR-associated endonuclease Cas9 C-terminal domain

Structural contacts of domain e4oo8A1 of H-group "His-Me finger endonucleases":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4oo8D2	A:x,y,z->D:X-1,Y,Z-1	CRISPR-associated endonuclease Cas9 alpha-helical lobe	Interaction Interface Pymol
e4oo8D1	A:x,y,z->D:X-1,Y,Z-1	Ribonuclease H-like	Interaction Interface Pymol