Domain ID e4oo8A5

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  • A: alpha complex topology
  • X: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • H: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • T: CRISPR-associated endonuclease Cas9 alpha-helical lobe
  • F: Cas9_REC,Cas9-BH
UID: 001711210
Type: Automatic domain
Parent: e4cmqB1
Range: A:58-713
PDB: 4oo8
PDB Description: CRISPR-associated endonuclease Cas9/Csn1
UniProt: Q99ZW2
Species:

Structure of domain e4oo8A5

Domains in the same chain:

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e4oo8A4 A:3-57,A:719-765,A:924-1102 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4oo8A5 A:58-713 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8A1 A:766-923 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4oo8A2 A:1103-1199 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8A3 A:1200-1366 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Domains in the same PDB:

e4oo8A4 A:3-57,A:719-765,A:924-1102 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4oo8A5 A:58-713 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8A1 A:766-923 His-Me finger endonucleases His-Me finger endonucleases His-Me finger endonucleases
e4oo8A2 A:1103-1199 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8A3 A:1200-1366 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain
e4oo8D1 D:3-57,D:714-765,D:919-1012,D:1038-1100 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4oo8D2 D:58-713 CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe CRISPR-associated endonuclease Cas9 alpha-helical lobe
e4oo8D3 D:1101-1200 SSHS domain SSHS domain in CRISPR-associated endonuclease Cas9 SSHS domain in CRISPR-associated endonuclease Cas9
e4oo8D4 D:1201-1366 CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain CRISPR-associated endonuclease Cas9 C-terminal domain

Structural contacts of domain e4oo8A5 of H-group "CRISPR-associated endonuclease Cas9 alpha-helical lobe":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4oo8D2 A:x,y,z->D:X,Y,Z-1 CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4oo8D2 A:X,Y-1,Z+1->D:x,y,z CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4oo8D2 A:x,y,z->D:X-1,Y+1,Z-1 CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4oo8D3 A:x,y,z->D:X-1,Y+1,Z SSHS domain in CRISPR-associated endonuclease Cas9 Interaction Interface Pymol
e4oo8A5 A:x,y,z->A:X-1,Y,Z CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol
e4oo8A5 A:X-1,Y,Z->A:x,y,z CRISPR-associated endonuclease Cas9 alpha-helical lobe Interaction Interface Pymol