Domain ID e4pe9K1

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  • A: mixed a+b and a/b
  • X: Ribonuclease H-like
  • H: Ribonuclease H-like
  • T: Ribonuclease H-like
  • F: Ribosomal_S11
UID: 001316959
Type: Automatic domain
Parent: e2uubK1
Range: K:13-129
PDB: 4pe9
PDB Description:
Hsap BLAST neighbor: P82912
Species:

Structure of domain e4pe9K1

Domains in the same chain:

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e4pe9K1 K:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like

Domains in the same PDB:

e4pe9C1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4pe9C2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4pe9E2 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4pe9E1 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4pe9F1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4pe9G1 G:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4pe9H1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4pe9H2 H:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4pe9J1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4pe9K1 K:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4pe9L1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4pe9N1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4pe9O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4pe9P1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4pe9R1 R:20-74 HTH HTH tri-helical
e4pe9T1 T:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4pe9U1 U:4-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e4pe9K1 of H-group "Ribonuclease H-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4pe9U1 K:X,Y,Z->U:x,y,z 30S ribosomal protein S21 Interaction Interface Pymol
e4pe9G1 K:x,y,z->G:X,Y,Z Ribosomal protein S7 Interaction Interface Pymol
e4pe9R1 K:X,Y,Z->R:x,y,z HTH Interaction Interface Pymol