Domain ID e4peaH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 001316979
Type: Automatic domain
Parent: e1seiA2
Range: H:67-130
PDB: 4pea
PDB Description:
Species:

Structure of domain e4peaH2

Domains in the same chain:

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e4peaH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4peaH2 H:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e4peaC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4peaC2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4peaE2 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4peaE1 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4peaF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4peaG1 G:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4peaH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4peaH2 H:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4peaJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4peaK1 K:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4peaL1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4peaN1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4peaO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4peaP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4peaR1 R:20-74 HTH HTH tri-helical
e4peaT1 T:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4peaU1 U:4-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e4peaH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4peaE1 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4peaL1 H:X,Y,Z->L:x,y,z Nucleic acid-binding proteins Interaction Interface Pymol