Domain ID e4ppzA1

Download files:
  • A: a/b three-layered sandwiches
  • X: Phosphorylase/hydrolase-like
  • H: Zn-dependent exopeptidases
  • T: Zn-dependent exopeptidases
  • F: Peptidase_M20
UID: 001148084
Type: Automatic domain
Parent: e1vgyA2
Range: A:2-180,A:294-376
Ligands: PO4 ZN
PDB: 4ppz
PDB Description: Succinyl-diaminopimelate desuccinylase
UniProt: Q9JYL2
Hsap BLAST neighbor: Q96KP4
Species:

Structure of domain e4ppzA1

Structural contacts of domain e4ppzA1 of H-group "Zn-dependent exopeptidases":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4ppzA2 A:x,y,z->A:-X+1,Y,-Z-1/2 Bacterial exopeptidase dimerisation domain Interaction Interface Pymol
e4ppzA2 A:-X+1,Y,-Z-1/2->A:x,y,z Bacterial exopeptidase dimerisation domain Interaction Interface Pymol
e4ppzA1 A:x,y,z->A:X,-Y,-Z Zn-dependent exopeptidases Interaction Interface Pymol
e4ppzA1 A:X,-Y,-Z->A:x,y,z Zn-dependent exopeptidases Interaction Interface Pymol
e4ppzA2 A:-X+1/2,-Y+1/2,Z-1/2->A:x,y,z Bacterial exopeptidase dimerisation domain Interaction Interface Pymol
e4ppzA1 A:x,y,z->A:-X+1,Y,-Z+1/2 Zn-dependent exopeptidases Interaction Interface Pymol
e4ppzA1 A:-X+1,Y,-Z+1/2->A:x,y,z Zn-dependent exopeptidases Interaction Interface Pymol
e4ppzA2 A:X,Y,Z-1->A:x,y,z Bacterial exopeptidase dimerisation domain Interaction Interface Pymol