Domain ID e4q84B4

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  • A: a+b two layers
  • X: dsRBD-like
  • H: Heterocyclase TruD C-terminal domain
  • T: Heterocyclase TruD C-terminal domain
  • F: YcaO
UID: 001325043
Type: Automatic domain
Parent: e4bs9A4
Range: B:12-103
Ligands: HG
PDB: 4q84
PDB Description: Ribosomal protein S12 methylthiotransferase accessory factor YcaO
UniProt: P75838
Species:

Structure of domain e4q84B4

Domains in the same chain:

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e4q84B4 B:12-103 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B3 B:104-213,B:347-406 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B2 B:214-346 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B1 B:407-584 Repetitive alpha hairpins Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain

Domains in the same PDB:

e4q84A4 A:11-103 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84A3 A:104-213,A:347-406 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84A2 A:214-346 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84A1 A:407-581 Repetitive alpha hairpins Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain
e4q84B4 B:12-103 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B3 B:104-213,B:347-406 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B2 B:214-346 dsRBD-like Heterocyclase TruD C-terminal domain Heterocyclase TruD C-terminal domain
e4q84B1 B:407-584 Repetitive alpha hairpins Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain

Structural contacts of domain e4q84B4 of H-group "Heterocyclase TruD C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4q84A1 B:-X+1/2,-Y,Z-1/2->A:x,y,z Ribosomal protein S12 methylthiotransferase accessory factor YcaO C-terminal domain Interaction Interface Pymol