ECOD: domain e4q9uA2

Domain ID e4q9uA2

A: alpha bundles
X: Bromodomain-like
H: RABEX-5 helical domain
T: RABEX-5 helical domain
F: VPS9

UID:	001556804
Type:	Manual and representative domain
Range:	A:225-389
PDB:	4q9u
PDB Description:	Rab5 GDP/GTP exchange factor
UniProt:	Q9UJ41
Hsap BLAST neighbor:	Q9UJ41
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4q9uA2

Domains in the same chain:

Download Pymol

e4q9uA1	A:134-224	VPS9 domain	VPS9 domain	VPS9 domain
e4q9uA2	A:225-389	Bromodomain-like	RABEX-5 helical domain	RABEX-5 helical domain

Domains in the same PDB:

e4q9uA1	A:134-224	VPS9 domain	VPS9 domain	VPS9 domain
e4q9uA2	A:225-389	Bromodomain-like	RABEX-5 helical domain	RABEX-5 helical domain
e4q9uB1	B:20-182	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4q9uF1	F:21-182	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4q9uA2 of H-group "RABEX-5 helical domain":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4q9uB1	A:X,Y,Z->B:x,y,z	P-loop domains-related	Interaction Interface Pymol