ECOD: domain e4q9uF1

Domain ID e4q9uF1

A: a/b three-layered sandwiches
X: P-loop domains-like
H: P-loop domains-related
T: P-loop containing nucleoside triphosphate hydrolases
F: Ras

UID:	001316295
Type:	Automatic domain
Parent:	e1mh1A1
Range:	F:21-182
PDB:	4q9u
PDB Description:	Ras-related protein Rab-5A
UniProt:	P20339
Hsap BLAST neighbor:	P20339
Species:	Homo sapiens

Domain
In chain context
In PDB context

Structure of domain e4q9uF1

Domains in the same chain:

Download Pymol

e4q9uF1	F:21-182	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Domains in the same PDB:

e4q9uA1	A:134-224	VPS9 domain	VPS9 domain	VPS9 domain
e4q9uA2	A:225-389	Bromodomain-like	RABEX-5 helical domain	RABEX-5 helical domain
e4q9uB1	B:20-182	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4q9uF1	F:21-182	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases

Structural contacts of domain e4q9uF1 of H-group "P-loop domains-related":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4q9uA1	F:-Y+1/2,X-1/2,Z+1/4->A:x,y,z	VPS9 domain	Interaction Interface Pymol
e4q9uB1	F:-Y+1/2,X-1/2,Z+1/4->B:x,y,z	P-loop domains-related	Interaction Interface Pymol