Domain ID e4qcmH2

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  • A: a+b two layers
  • X: Ribosomal protein S8, C-terminal domain
  • H: Ribosomal protein S8, C-terminal domain
  • T: Ribosomal protein S8, C-terminal domain
  • F: Ribosomal_S8
UID: 001323699
Type: Automatic domain
Parent: e1seiA2
Range: H:67-138
PDB: 4qcm
PDB Description:
Species:

Structure of domain e4qcmH2

Domains in the same chain:

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e4qcmH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcmH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain

Domains in the same PDB:

e4qcmC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcmC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcmE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcmE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcmF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcmG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcmH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcmH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcmJ1 J:4-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcmK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcmL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcmN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcmO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcmP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcmR1 R:20-87 HTH HTH tri-helical
e4qcmT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcmH2 of H-group "Ribosomal protein S8, C-terminal domain":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcmE1 H:x,y,z->E:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol