Domain ID e4qcoL1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 001323758
Type: Automatic domain
Parent: e2uubL1
Range: L:5-126
Ligands: MG
PDB: 4qco
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e4qcoL1

Domains in the same chain:

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e4qcoL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4qcoC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcoC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcoE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcoE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcoF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcoG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcoH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcoH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcoJ1 J:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcoK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcoL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcoN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcoO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcoP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcoR1 R:20-87 HTH HTH tri-helical
e4qcoT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcoL1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcoH2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol