Domain ID e4qcpF1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 001323770
Type: Automatic domain
Parent: e1dmgA1
Range: F:6-208
Ligands: MG
PDB: 4qcp
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e4qcpF1

Domains in the same chain:

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e4qcpF1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e4qcp01 0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4qcp11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4qcp21 2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4qcp31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4qcp41 4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4qcp51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4qcp71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4qcp81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4qcp91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4qcpD2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcpD1 D:127-276 SH3 SH3 SH3
e4qcpF1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4qcpG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4qcpH2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qcpH1 H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qcpI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4qcpI2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4qcpN1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4qcpO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4qcpR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4qcpU1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4qcpV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4qcpW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4qcpX1 X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4qcpY1 Y:1-107 SH3 SH3 SH3
e4qcpZ1 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4qcpZ2 Z:93-174 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4qcpF1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 F:X,Y,Z->P:x,y,z Ribosomal protein L4 Interaction Interface Pymol