Domain ID e4qcsL1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 001323868
Type: Automatic domain
Parent: e2uubL1
Range: L:5-126
Ligands: MG
PDB: 4qcs
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e4qcsL1

Domains in the same chain:

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e4qcsL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4qcsC2 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4qcsC1 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4qcsE2 E:5-72 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4qcsE1 E:73-152 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4qcsF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4qcsG1 G:2-156 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4qcsH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4qcsH2 H:67-138 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4qcsJ1 J:5-100 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4qcsK1 K:13-126 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4qcsL1 L:5-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcsN1 N:2-61 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4qcsO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4qcsP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4qcsR1 R:20-87 HTH HTH tri-helical
e4qcsT1 T:8-103 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20

Structural contacts of domain e4qcsL1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcsH2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol