Domain ID e4qcvU1

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  • A: alpha arrays
  • X: PABP domain-like
  • H: Ribosomal protein L20
  • T: Ribosomal protein L20
  • F: Ribosomal_L20
UID: 001323948
Type: Automatic domain
Parent: e4v19U1
Range: U:2-117
Ligands: MG
PDB: 4qcv
PDB Description:
Hsap BLAST neighbor: Q9BYC9
Species:

Structure of domain e4qcvU1

Domains in the same chain:

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e4qcvU1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20

Domains in the same PDB:

e4qcv01 0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4qcv11 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4qcv21 2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4qcv31 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4qcv41 4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4qcv51 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4qcv71 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4qcv81 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4qcv91 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4qcvD2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qcvD1 D:127-276 SH3 SH3 SH3
e4qcvF1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4qcvG1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4qcvH2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qcvH1 H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qcvI1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4qcvI2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4qcvN1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4qcvO1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4qcvR1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4qcvU1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4qcvV1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4qcvW1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4qcvX1 X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4qcvY1 Y:1-107 SH3 SH3 SH3
e4qcvZ2 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4qcvZ1 Z:93-171 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4qcvU1 of H-group "Ribosomal protein L20":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qcvV1 U:X,Y,Z->V:x,y,z Ribosomal protein L21p Interaction Interface Pymol
e4qcvN1 U:x,y,z->N:X,Y,Z Ribosomal protein L13 and L16-A Interaction Interface Pymol