Domain ID e4qd1F1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 001324100
Type: Automatic domain
Parent: e1dmgA1
Range: F:6-208
Ligands: MG
PDB: 4qd1
PDB Description:
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e4qd1F1

Domains in the same chain:

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e4qd1F1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e4qd101 0:2-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4qd111 1:2-98 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4qd121 2:1-70 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4qd131 3:2-60 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4qd141 4:1-69 Ribosomal protein L31p Ribosomal protein L31p Ribosomal protein L31p
e4qd151 5:2-60 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4qd171 7:1-48 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4qd181 8:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4qd191 9:1-37 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4qd1D2 D:2-126 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4qd1D1 D:127-276 SH3 SH3 SH3
e4qd1F1 F:6-208 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4qd1G1 G:2-182 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4qd1H2 H:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qd1H1 H:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4qd1I1 I:1-53 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4qd1I2 I:54-146 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4qd1N1 N:1-140 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4qd1O1 O:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4qd1R1 R:1-118 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4qd1U1 U:2-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4qd1V1 V:1-101 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4qd1W1 W:1-112 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4qd1X1 X:1-95 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4qd1Y1 Y:1-107 SH3 SH3 SH3
e4qd1Z2 Z:1-92 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4qd1Z1 Z:93-174 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related

Structural contacts of domain e4qd1F1 of H-group "Ribosomal protein L4":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1dmgA1 F:X,Y,Z->P:x,y,z Ribosomal protein L4 Interaction Interface Pymol