| UID: | 001322518 |
|---|---|
| Type: | Automatic domain |
| Parent: | e4qilA1 |
| Range: | A:89-161,A:312-398 |
| Ligands: | CL |
| PDB: | 4qik |
| PDB Description: | Roquin-1 |
| UniProt: | Q5TC82 |
| Hsap BLAST neighbor: | Q5TC82 |
| Species: | Homo sapiens |
Structure of domain e4qikA1
Domains in the same chain:
| e4qikA1 | A:89-161,A:312-398 | Four-helical up-and-down bundle | Helical bundle in ROQ domain | Helical bundle in ROQ domain |
| e4qikA2 | A:162-256 | HTH | HTH | winged |
| e4qikA3 | A:257-311 | HTH | HTH | tri-helical |
Domains in the same PDB:
| e4qikA1 | A:89-161,A:312-398 | Four-helical up-and-down bundle | Helical bundle in ROQ domain | Helical bundle in ROQ domain |
| e4qikA2 | A:162-256 | HTH | HTH | winged |
| e4qikA3 | A:257-311 | HTH | HTH | tri-helical |
| e4qikB1 | B:88-161,B:312-398 | Four-helical up-and-down bundle | Helical bundle in ROQ domain | Helical bundle in ROQ domain |
| e4qikB2 | B:162-256 | HTH | HTH | winged |
| e4qikB3 | B:257-311 | HTH | HTH | tri-helical |
Structural contacts of domain e4qikA1 of H-group "Helical bundle in ROQ domain":
The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.
| Domain ID | Symmetry operator | H-group | Visualization |
|---|---|---|---|
| e4qikB2 | A:X-1/2,-Y+1/2,-Z->B:x,y,z | HTH | Interaction Interface Pymol |
| e4qikB1 | A:X-1/2,-Y+1/2,-Z->B:x,y,z | Helical bundle in ROQ domain | Interaction Interface Pymol |
| e4qikB2 | A:x,y,z->B:-X-1,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
| e4qikB3 | A:x,y,z->B:-X-1,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
| e4qikB1 | A:X-1/2,-Y-1/2,-Z->B:x,y,z | Helical bundle in ROQ domain | Interaction Interface Pymol |
| e4qikA2 | A:x,y,z->A:-X-1,Y-1/2,-Z+1/2 | HTH | Interaction Interface Pymol |
| e4qikB1 | A:-X-1/2,-Y,Z-1/2->B:x,y,z | Helical bundle in ROQ domain | Interaction Interface Pymol |
| e4qikB3 | A:-X-1/2,-Y,Z-1/2->B:x,y,z | HTH | Interaction Interface Pymol |
