ECOD: domain e4qikB3

Domain ID e4qikB3

A: alpha arrays
X: HTH
H: HTH
T: tri-helical
F: ROQ_II

UID:	001322523
Type:	Automatic domain
Parent:	e4qilA3
Range:	B:257-311
Ligands:	CL
PDB:	4qik
PDB Description:	Roquin-1
UniProt:	Q5TC82
Hsap BLAST neighbor:	Q5TC82
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4qikB1	B:88-161,B:312-398	Four-helical up-and-down bundle	Helical bundle in ROQ domain	Helical bundle in ROQ domain
e4qikB2	B:162-256	HTH	HTH	winged
e4qikB3	B:257-311	HTH	HTH	tri-helical

Domains in the same PDB:

e4qikA1	A:89-161,A:312-398	Four-helical up-and-down bundle	Helical bundle in ROQ domain	Helical bundle in ROQ domain
e4qikA2	A:162-256	HTH	HTH	winged
e4qikA3	A:257-311	HTH	HTH	tri-helical
e4qikB1	B:88-161,B:312-398	Four-helical up-and-down bundle	Helical bundle in ROQ domain	Helical bundle in ROQ domain
e4qikB2	B:162-256	HTH	HTH	winged
e4qikB3	B:257-311	HTH	HTH	tri-helical

Structural contacts of domain e4qikB3 of H-group "HTH":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4qikA2	B:x,y,z->A:X-1/2,-Y+1/2,-Z	HTH	Interaction Interface Pymol
e4qikA1	B:-X-1,Y-1/2,-Z+1/2->A:x,y,z	Helical bundle in ROQ domain	Interaction Interface Pymol
e4qikA3	B:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol
e4qikA2	B:x,y,z->A:X,Y,Z	HTH	Interaction Interface Pymol
e4qikA1	B:x,y,z->A:-X-1/2,-Y,Z-1/2	Helical bundle in ROQ domain	Interaction Interface Pymol