Domain ID e4qkbC1

Download files:
  • A: beta sandwiches
  • X: jelly-roll
  • H: Double-stranded beta-helix
  • T: Double-stranded beta-helix
  • F: 2OG-FeII_Oxy_2
UID: 001325392
Type: Automatic domain
Parent: e2fdiA1
Range: C:16-206
Ligands: AKG MN
PDB: 4qkb
PDB Description: Alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial
UniProt: Q9BT30
Hsap BLAST neighbor: Q9BT30
Species: Homo sapiens

Structure of domain e4qkbC1

Structural contacts of domain e4qkbC1 of H-group "Double-stranded beta-helix":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4qkbA1 C:x,y,z->A:X,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e4qkbB1 C:x,y,z->B:X,Y,Z Double-stranded beta-helix Interaction Interface Pymol
e4qkbB1 C:X-1,Y,Z->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4qkbA1 C:x,y,z->A:X,Y,Z-1 Double-stranded beta-helix Interaction Interface Pymol
e4qkbC1 C:x,y,z->C:-X+1,Y-1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e4qkbC1 C:-X+1,Y-1/2,-Z->C:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4qkbB1 C:X-1,Y,Z-1->B:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4qkbA1 C:X-1,Y,Z->A:x,y,z Double-stranded beta-helix Interaction Interface Pymol
e4qkbB1 C:x,y,z->B:-X,Y-1/2,-Z Double-stranded beta-helix Interaction Interface Pymol
e4qkbA1 C:x,y,z->A:-X+1,Y-1/2,-Z+1 Double-stranded beta-helix Interaction Interface Pymol