ECOD: domain e4r1fB2

Domain ID e4r1fB2

A: a+b two layers
X: Ribosomal protein S5 domain 2-like
H: Ribosomal protein S5 domain 2-like
T: Ribosomal protein S5 domain 2-like
F: DNA_gyraseB

UID:	001388899
Type:	Automatic domain
Parent:	e1ei1A1
Range:	B:266-424
Ligands:	SO4
PDB:	4r1f
PDB Description:	DNA topoisomerase 2-alpha
UniProt:	P11388
Hsap BLAST neighbor:	P11388
Species:	Homo sapiens

Domains in the same chain:

Download Pymol

e4r1fB1	B:29-265	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fB2	B:266-424	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4r1fA1	A:29-265	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fA2	A:266-422	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4r1fB1	B:29-265	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fB2	B:266-424	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4r1fC1	C:29-269	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fC2	C:270-426	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4r1fD1	D:29-269	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fD2	D:270-425	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like

Structural contacts of domain e4r1fB2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain ID	Symmetry operator	H-group	Visualization
e4r1fA1	B:x,y,z->A:X,Y,Z	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Interaction Interface Pymol
e4r1fA2	B:x,y,z->A:X,Y,Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e4r1fA1	B:-X+2,Y-1/2,-Z+1->A:x,y,z	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Interaction Interface Pymol
e4r1fC2	B:x,y,z->C:-X+1,Y-1/2,-Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e4r1fD2	B:x,y,z->D:-X+1,Y-1/2,-Z	Ribosomal protein S5 domain 2-like	Interaction Interface Pymol
e4r1fC1	B:X-1,Y,Z->C:x,y,z	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	Interaction Interface Pymol