Domain ID e4r1fD2

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  • A: a+b two layers
  • X: Ribosomal protein S5 domain 2-like
  • H: Ribosomal protein S5 domain 2-like
  • T: Ribosomal protein S5 domain 2-like
  • F: DNA_gyraseB
UID: 001388903
Type: Automatic domain
Parent: e1ei1A1
Range: D:270-425
Ligands: SO4
PDB: 4r1f
PDB Description: DNA topoisomerase 2-alpha
UniProt: P11388
Hsap BLAST neighbor: P11388
Species: Homo sapiens

Structure of domain e4r1fD2

Domains in the same chain:

e4r1fD1 D:29-269 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fD2 D:270-425 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Domains in the same PDB:

e4r1fA1 A:29-265 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fA2 A:266-422 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4r1fB1 B:29-265 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fB2 B:266-424 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4r1fC1 C:29-269 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fC2 C:270-426 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4r1fD1 D:29-269 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
e4r1fD2 D:270-425 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like

Structural contacts of domain e4r1fD2 of H-group "Ribosomal protein S5 domain 2-like":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4r1fC2 D:x,y,z->C:X,Y,Z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4r1fA2 D:-X+1,Y-1/2,-Z->A:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4r1fB2 D:-X+1,Y-1/2,-Z->B:x,y,z Ribosomal protein S5 domain 2-like Interaction Interface Pymol
e4r1fC1 D:-X,Y-1/2,-Z->C:x,y,z ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase Interaction Interface Pymol