Domain ID e4tmaK1

Download files:
  • A: few secondary structure elements
  • X: Glucocorticoid receptor-like
  • H: LIM domain-like
  • T: LIM domain-like
  • F: YacG
UID: 001316451
Type: Automatic domain
Parent: e1lv3A1
Range: K:5-63
Ligands: ZN
PDB: 4tma
PDB Description: DNA gyrase inhibitor YacG
UniProt: P0A8H8
Species:

Structure of domain e4tmaK1

Domains in the same chain:

Download Pymol

e4tmaK1 K:5-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Domains in the same PDB:

e4tmaA1 A:17-163 HTH HTH winged
e4tmaA2 A:164-337 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4tmaA3 A:338-524 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4tmaB3 B:406-532,B:741-783 HAD domain-like HAD domain-related Toprim domain
e4tmaB1 B:533-562,B:732-740 SSHS domain SSHS domain in type II DNA topoisomerase SSHS domain in type II DNA topoisomerase
e4tmaB2 B:563-731 DNA gyrase subunit B insertion domain DNA gyrase subunit B insertion domain DNA gyrase subunit B insertion domain
e4tmaC1 C:20-163 HTH HTH winged
e4tmaC3 C:164-337 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4tmaC2 C:338-428,C:451-525 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4tmaD1 D:400-532,D:693-695,D:745-781 HAD domain-like HAD domain-related Toprim domain
e4tmaD2 D:533-596,D:687-692 SSHS domain SSHS domain in type II DNA topoisomerase SSHS domain in type II DNA topoisomerase
e4tmaE1 E:26-163 HTH HTH winged
e4tmaE2 E:164-337 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4tmaE3 E:338-524 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4tmaF2 F:404-532,F:741-781 HAD domain-like HAD domain-related Toprim domain
e4tmaF1 F:533-562,F:732-740 SSHS domain SSHS domain in type II DNA topoisomerase SSHS domain in type II DNA topoisomerase
e4tmaF3 F:563-731 DNA gyrase subunit B insertion domain DNA gyrase subunit B insertion domain DNA gyrase subunit B insertion domain
e4tmaG1 G:22-163 HTH HTH winged
e4tmaG2 G:164-337 a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase a+b domain in type II DNA topoisomerase
e4tmaG3 G:338-523 alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase alpha-helical domain in type II DNA topoisomerase
e4tmaH2 H:400-532,H:742-781 HAD domain-like HAD domain-related Toprim domain
e4tmaH1 H:533-541,H:571-596,H:735-741 SSHS domain SSHS domain in type II DNA topoisomerase SSHS domain in type II DNA topoisomerase
e4tmaI1 I:5-51 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4tmaJ1 J:3-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4tmaK1 K:5-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4tmaL1 L:5-52 Glucocorticoid receptor-like LIM domain-like LIM domain-like

Structural contacts of domain e4tmaK1 of H-group "LIM domain-like":

Sorry, the images are being generated.

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e1lv3A1 K:x,y,z->D:X,Y,Z LIM domain-like Interaction Interface Pymol
e4tmaA1 K:x,y,z->A:X,Y,Z HTH Interaction Interface Pymol
e4tmaC1 K:x,y,z->C:X,Y,Z HTH Interaction Interface Pymol
e4tmaC1 K:x,y,z->B:X,Y,Z HTH Interaction Interface Pymol