Domain ID e4tp8L1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 001317691
Type: Automatic domain
Parent: e2uubL1
Range: L:2-124
PDB: 4tp8
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e4tp8L1

Domains in the same chain:

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e4tp8L1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4tp8C1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4tp8C2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4tp8E2 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4tp8E1 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4tp8F1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4tp8G1 G:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4tp8H1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4tp8H2 H:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4tp8J1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4tp8K1 K:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4tp8L1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4tp8N1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4tp8O1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4tp8P1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4tp8R1 R:20-74 HTH HTH tri-helical
e4tp8T1 T:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4tp8U1 U:4-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e4tp8L1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4tp8H2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol