Domain ID e4tpaL1

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosom_S12_S23
UID: 001317749
Type: Automatic domain
Parent: e2uubL1
Range: L:2-124
Ligands: MG
PDB: 4tpa
PDB Description:
Hsap BLAST neighbor: O15235
Species:

Structure of domain e4tpaL1

Domains in the same chain:

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e4tpaL1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4tpaC1 C:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4tpaC2 C:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4tpaE2 E:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4tpaE1 E:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4tpaF1 F:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4tpaG1 G:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4tpaH1 H:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4tpaH2 H:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4tpaJ1 J:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4tpaK1 K:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4tpaL1 L:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4tpaN1 N:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4tpaO1 O:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4tpaP1 P:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4tpaR1 R:20-74 HTH HTH tri-helical
e4tpaT1 T:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4tpaU1 U:4-54 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21

Structural contacts of domain e4tpaL1 of H-group "Nucleic acid-binding proteins":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4tpaH2 L:x,y,z->H:X,Y,Z Ribosomal protein S8, C-terminal domain Interaction Interface Pymol