Domain ID e4u4ud81

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosomal_S28e
UID: 001425819
Type: Automatic domain
Parent: e1ny4A1
Range: d8:5-67
PDB: 4u4u
PDB Description: 40S ribosomal protein S28-A
UniProt: Q3E7X9
Hsap BLAST neighbor: P62857
Species:

Structure of domain e4u4ud81

Domains in the same chain:

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e4u4ud81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4u4uc01 c0:1-98 HTH HTH winged
e4u4uC01 C0:1-96 HTH HTH winged
e4u4uc11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uC11 C1:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uc21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4uC21 C2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4uc32 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u4uc31 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u4uC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u4uC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u4uc41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u4uC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u4uc51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u4uC51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u4uc61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u4uC61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u4uc71 c7:2-122 HTH HTH FF domain
e4u4uC71 C7:2-126 HTH HTH FF domain
e4u4uc81 c8:2-146 HhH/H2TH H2TH H2TH
e4u4uC81 C8:2-146 HhH/H2TH H2TH H2TH
e4u4uc91 c9:2-144 HTH HTH winged
e4u4uC91 C9:2-144 HTH HTH winged
e4u4ud01 d0:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u4uD01 D0:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u4ud11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u4uD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u4ud22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u4ud21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u4uD21 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u4uD22 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u4ud31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4ud41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4uD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4ud51 d5:37-105 HTH HTH winged
e4u4uD51 D5:36-105 HTH HTH winged
e4u4ud61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4uD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4ud71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4ud81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4ud91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4uD91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4ue01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u4uE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u4ue11 e1:77-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uE11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4ul21 l2:99-253 SH3 SH3 SH3
e4u4ul22 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uL22 L2:99-253 SH3 SH3 SH3
e4u4uL21 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4ul31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u4uL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u4ul43 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u4ul42 l4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u4uL43 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u4uL42 L4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u4ul51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u4uL51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u4ul61 l6:2-176 SH3 SH3 SH3
e4u4uL61 L6:2-109,L6:129-176 SH3 SH3 SH3
e4u4ul71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u4uL71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u4ul81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4uL81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4ul92 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u4ul91 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u4uL92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u4uL91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u4um01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u4uM01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u4um11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u4uM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u4um31 m3:7-193 RPL13 RPL13 RPL13
e4u4uM31 M3:7-190 RPL13 RPL13 RPL13
e4u4um41 m4:2-138 SH3 SH3 SH3
e4u4uM41 M4:3-138 SH3 SH3 SH3
e4u4um51 m5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4uM51 M5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4um61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u4uM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u4um71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u4uM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u4um81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u4uM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u4um91 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u4um92 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u4uM92 M9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u4uM91 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u4un02 n0:1-69 GP2-like RplX-like RplX-like
e4u4un01 n0:70-172 GP2-like RplX-like RplX-like
e4u4uN02 N0:1-69 GP2-like RplX-like RplX-like
e4u4uN01 N0:70-172 GP2-like RplX-like RplX-like
e4u4un11 n1:2-160 SH3 SH3 SH3
e4u4uN11 N1:2-160 SH3 SH3 SH3
e4u4un21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u4uN21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u4un31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u4uN31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u4un41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4uN41 N4:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u4un51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4uN51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u4un61 n6:2-127 SH3 SH3 SH3
e4u4uN61 N6:2-127 SH3 SH3 SH3
e4u4un71 n7:2-136 SH3 SH3 SH3
e4u4uN71 N7:2-136 SH3 SH3 SH3
e4u4un81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u4uN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u4un91 n9:2-47 RPL29 RPL29 RPL29
e4u4uN91 N9:2-47 RPL29 RPL29 RPL29
e4u4uo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4uO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u4uo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u4uO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u4uo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u4uO21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u4uo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u4uO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u4uo41 o4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u4uO41 O4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u4uo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u4uO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u4uo61 o6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u4uO61 O6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u4uo71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uO71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uo81 o8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u4uO81 O8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u4uo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u4uO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u4up01 p0:3-107,p0:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e4u4uq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u4uQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u4uq21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4uQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u4us01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u4uS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u4us11 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u4us12 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u4uS12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u4uS11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u4us23 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u4us22 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u4us21 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u4uS22 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u4uS21 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u4uS23 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u4us31 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u4us32 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u4uS32 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u4uS31 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u4us42 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4us43 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u4us41 s4:176-261 SH3 SH3 SH3
e4u4uS42 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u4uS43 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u4uS41 S4:176-261 SH3 SH3 SH3
e4u4us51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u4uS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u4us61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u4uS61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u4us71 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u4us72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u4uS71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u4uS72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u4us81 s8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u4uS81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u4us91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u4uS91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u4usM1 sM:23-85,sM:119-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u4uSM1 SM:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u4usR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e4u4uSR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed