ECOD: domain e4u4zQ21

Domain ID e4u4zQ21

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L44

UID:	001426265
Type:	Automatic domain
Parent:	e1vqo31
Range:	Q2:2-106
Ligands:	3K5 MG OHX ZN
PDB:	4u4z
PDB Description:	60S ribosomal protein L42-A
UniProt:	P0CX27
Hsap BLAST neighbor:	P83881
Species:

Domains in the same chain:

Download Pymol

e4u4zQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4u4zc01	c0:1-98	HTH	HTH	winged
e4u4zC01	C0:1-96	HTH	HTH	winged
e4u4zc11	c1:2-147	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zC11	C1:2-156	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zc21	c2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zC21	C2:20-143	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zc32	c3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e4u4zc31	c3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4u4zC31	C3:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4u4zC32	C3:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e4u4zc41	c4:10-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4u4zC41	C4:11-137	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4u4zc51	c5:4-138	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4u4zC51	C5:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4u4zc61	c6:2-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4u4zC61	C6:3-143	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4u4zc71	c7:2-122	HTH	HTH	FF domain
e4u4zC71	C7:2-126	HTH	HTH	FF domain
e4u4zc81	c8:2-146	HhH/H2TH	H2TH	H2TH
e4u4zC81	C8:2-146	HhH/H2TH	H2TH	H2TH
e4u4zc91	c9:2-144	HTH	HTH	winged
e4u4zC91	C9:2-144	HTH	HTH	winged
e4u4zd01	d0:12-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4u4zD01	D0:15-121	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4u4zd11	d1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e4u4zD11	D1:1-87	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e4u4zd22	d2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4u4zd21	d2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4u4zD22	D2:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4u4zD21	D2:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4u4zd31	d3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zD31	D3:2-145	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zd41	d4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zD41	D4:2-135	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zd51	d5:37-105	HTH	HTH	winged
e4u4zD51	D5:36-105	HTH	HTH	winged
e4u4zd61	d6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4zD61	D6:2-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4zd71	d7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zD71	D7:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zd81	d8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zD81	D8:5-67	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zd91	d9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4zD91	D9:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4ze01	e0:2-63	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e4u4zE01	E0:2-61	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e4u4ze11	e1:77-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zE11	E1:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zl21	l2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zl22	l2:99-253	SH3	SH3	SH3
e4u4zL22	L2:99-253	SH3	SH3	SH3
e4u4zL21	L2:2-98	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zl31	l3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4u4zL31	L3:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4u4zl42	l4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4u4zl43	l4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u4zL43	L4:270-362	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u4zL42	L4:2-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4u4zl51	l5:4-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4u4zL51	L5:2-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4u4zl61	l6:2-176	SH3	SH3	SH3
e4u4zL61	L6:2-109,L6:129-176	SH3	SH3	SH3
e4u4zl71	l7:22-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4u4zL71	L7:23-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4u4zl81	l8:24-254	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zL81	L8:24-256	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zl92	l9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4u4zl91	l9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4u4zL92	L9:86-191	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4u4zL91	L9:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4u4zm01	m0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4u4zM01	M0:2-221	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4u4zm11	m1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4u4zM11	M1:6-174	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4u4zm31	m3:7-193	RPL13	RPL13	RPL13
e4u4zM31	M3:7-190	RPL13	RPL13	RPL13
e4u4zm41	m4:2-138	SH3	SH3	SH3
e4u4zM41	M4:3-138	SH3	SH3	SH3
e4u4zm51	m5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zM51	M5:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zm61	m6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4u4zM61	M6:3-199	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4u4zm71	m7:2-156	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4u4zM71	M7:2-184	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4u4zm81	m8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4u4zM81	M8:2-186	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4u4zm91	m9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4u4zm92	m9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4u4zM92	M9:57-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4u4zM91	M9:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4u4zn01	n0:70-172	GP2-like	RplX-like	RplX-like
e4u4zn02	n0:1-69	GP2-like	RplX-like	RplX-like
e4u4zN01	N0:70-172	GP2-like	RplX-like	RplX-like
e4u4zN02	N0:1-69	GP2-like	RplX-like	RplX-like
e4u4zn11	n1:2-160	SH3	SH3	SH3
e4u4zN11	N1:2-160	SH3	SH3	SH3
e4u4zn21	n2:11-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4u4zN21	N2:9-108	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4u4zn31	n3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4u4zN31	N3:2-137	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4u4zn41	n4:1-135	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4zN41	N4:1-98	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4u4zn51	n5:23-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zN51	N5:22-142	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4u4zn61	n6:2-127	SH3	SH3	SH3
e4u4zN61	N6:2-127	SH3	SH3	SH3
e4u4zn71	n7:2-136	SH3	SH3	SH3
e4u4zN71	N7:2-136	SH3	SH3	SH3
e4u4zn81	n8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4u4zN81	N8:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4u4zn91	n9:2-47	RPL29	RPL29	RPL29
e4u4zN91	N9:2-47	RPL29	RPL29	RPL29
e4u4zo01	o0:6-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zO01	O0:9-105	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4u4zo11	o1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4u4zO11	O1:4-112	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4u4zo21	o2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4u4zO21	O2:2-128	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4u4zo31	o3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e4u4zO31	O3:2-107	cradle loop barrel	RIFT-related	Alanine racemase-C
e4u4zo41	o4:2-103	Glucocorticoid receptor-like	RPL34	RPL34
e4u4zO41	O4:2-103	Glucocorticoid receptor-like	RPL34	RPL34
e4u4zo51	o5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4u4zO51	O5:2-120	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4u4zo61	o6:2-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4u4zO61	O6:2-100	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4u4zo71	o7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zO71	O7:2-88	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zo81	o8:3-73	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u4zO81	O8:3-73	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u4zo91	o9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4u4zO91	O9:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4u4zp01	p0:3-107,p0:184-221	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e4u4zq01	q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zQ01	Q0:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zq11	q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e4u4zQ11	Q1:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e4u4zq21	q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zQ21	Q2:2-106	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zq31	q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zQ31	Q3:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4u4zs01	s0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4u4zS01	S0:2-207	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4u4zs11	s1:114-235	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e4u4zs12	s1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e4u4zS12	S1:20-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e4u4zS11	S1:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e4u4zs23	s2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4u4zs22	s2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4u4zs21	s2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u4zS22	S2:176-250	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4u4zS21	S2:34-108	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u4zS23	S2:109-175	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4u4zs31	s3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4u4zs32	s3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4u4zS31	S3:3-91	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4u4zS32	S3:92-225	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4u4zs43	s4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4u4zs42	s4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zs41	s4:176-261	SH3	SH3	SH3
e4u4zS41	S4:176-261	SH3	SH3	SH3
e4u4zS43	S4:2-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4u4zS42	S4:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4u4zs51	s5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4u4zS51	S5:20-225	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4u4zs61	s6:1-218	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4u4zS61	S6:1-226	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4u4zs72	s7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4u4zs71	s7:2-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4u4zS72	S7:106-187	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4u4zS71	S7:4-105	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4u4zs81	s8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4u4zS81	S8:2-200	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4u4zs91	s9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4u4zS91	S9:2-186	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4u4zsM1	sM:23-85,sM:119-174	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e4u4zSM1	SM:9-176	Suppressor protein STM1	Suppressor protein STM1	Suppressor protein STM1
e4u4zsR1	sR:2-319	beta-propeller-like	beta-propeller	7-bladed
e4u4zSR1	SR:2-319	beta-propeller-like	beta-propeller	7-bladed