Domain ID e4u55O81

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  • A: a+b two layers
  • X: SRP9/14-like
  • H: Signal recognition particle alu RNA binding heterodimer SRP9/14-related
  • T: Signal recognition particle alu RNA binding heterodimer SRP9/14-related
  • F: Ribosomal_L38e
UID: 001812652
Type: Automatic domain
Parent: e4v8pAP1
Range: O8:3-73
PDB: 4u55
PDB Description: 60S ribosomal protein L38
UniProt: P49167
Hsap BLAST neighbor: P63173
Species:

Structure of domain e4u55O81

Domains in the same chain:

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e4u55O81 O8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related

Domains in the same PDB:

e4u55c01 c0:1-98 HTH HTH winged
e4u55C01 C0:1-96 HTH HTH winged
e4u55c11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55C11 C1:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55c21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55C21 C2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55c31 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u55c32 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u55C32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u55C31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u55c41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u55C41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u55c51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u55C51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u55c61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u55C61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u55c71 c7:2-122 HTH HTH FF domain
e4u55C71 C7:2-126 HTH HTH FF domain
e4u55c81 c8:2-146 HhH/H2TH H2TH H2TH
e4u55C81 C8:2-146 HhH/H2TH H2TH H2TH
e4u55c91 c9:2-144 HTH HTH winged
e4u55C91 C9:2-144 HTH HTH winged
e4u55d01 d0:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u55D01 D0:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u55d11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u55D11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u55d21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u55d22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u55D21 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u55D22 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u55d31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55D31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55d41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55D41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55d51 d5:37-105 HTH HTH winged
e4u55D51 D5:36-105 HTH HTH winged
e4u55d61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55D61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55d71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55D71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55d81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55D81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55d91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55D91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55e01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u55E01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u55e11 e1:77-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55E11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55l22 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55l21 l2:99-253 SH3 SH3 SH3
e4u55L21 L2:99-253 SH3 SH3 SH3
e4u55L22 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55l31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u55L31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u55l42 l4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u55l43 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u55L42 L4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u55L43 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u55l51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u55L51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u55l61 l6:2-176 SH3 SH3 SH3
e4u55L61 L6:2-109,L6:129-176 SH3 SH3 SH3
e4u55l71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u55L71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u55l81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55L81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55l91 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u55l92 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u55L91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u55L92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u55m01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u55M01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u55m11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u55M11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u55m31 m3:7-193 RPL13 RPL13 RPL13
e4u55M31 M3:7-190 RPL13 RPL13 RPL13
e4u55m41 m4:2-138 SH3 SH3 SH3
e4u55M41 M4:3-138 SH3 SH3 SH3
e4u55m51 m5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55M51 M5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55m61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u55M61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u55m71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u55M71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u55m81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u55M81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u55m91 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u55m92 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u55M91 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u55M92 M9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u55n02 n0:1-69 GP2-like RplX-like RplX-like
e4u55n01 n0:70-172 GP2-like RplX-like RplX-like
e4u55N02 N0:1-69 GP2-like RplX-like RplX-like
e4u55N01 N0:70-172 GP2-like RplX-like RplX-like
e4u55n11 n1:2-160 SH3 SH3 SH3
e4u55N11 N1:2-160 SH3 SH3 SH3
e4u55n21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u55N21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u55n31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u55N31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u55n41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55N41 N4:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u55n51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55N51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u55n61 n6:2-127 SH3 SH3 SH3
e4u55N61 N6:2-127 SH3 SH3 SH3
e4u55n71 n7:2-136 SH3 SH3 SH3
e4u55N71 N7:2-136 SH3 SH3 SH3
e4u55n81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u55N81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u55n91 n9:2-47 RPL29 RPL29 RPL29
e4u55N91 N9:2-47 RPL29 RPL29 RPL29
e4u55o01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55O01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u55o11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u55O11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u55o21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u55O21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u55o31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u55O31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u55o41 o4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u55O41 O4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u55o51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u55O51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u55o61 o6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u55O61 O6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u55o71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55O71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55o81 o8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u55O81 O8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u55o91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u55O91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u55p01 p0:3-107,p0:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e4u55q01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55Q01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55q11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u55Q11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u55q21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55Q21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55q31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55Q31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u55s01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u55S01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u55s11 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u55s12 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u55S12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u55S11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u55s21 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u55s23 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u55s22 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u55S22 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u55S23 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u55S21 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u55s32 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u55s31 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u55S31 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u55S32 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u55s43 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u55s41 s4:176-261 SH3 SH3 SH3
e4u55s42 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55S42 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u55S43 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u55S41 S4:176-261 SH3 SH3 SH3
e4u55s51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u55S51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u55s61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u55S61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u55s72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u55s71 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u55S72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u55S71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u55s81 s8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u55S81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u55s91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u55S91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u55sM1 sM:23-85,sM:119-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u55SM1 SM:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u55sR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e4u55SR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed