Domain ID e4u5eD3

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  • A: a/b three-layered sandwiches
  • X: Periplasmic binding protein-like II
  • H: Periplasmic binding protein-like II
  • T: Periplasmic binding protein-like II
  • F: Lig_chan-Glu_bd
UID: 001669053
Type: Automatic domain
Parent: e1mqiA3
Range: D:382-497,D:731-789
Ligands: FWF KAI
PDB: 4u5e
PDB Description: Glutamate receptor 2
UniProt: P19491
Hsap BLAST neighbor: P42262
Species: Rattus norvegicus

Structure of domain e4u5eD3

Domains in the same chain:

Download Pymol

e4u5eD1 D:6-111,D:244-381 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eD4 D:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eD3 D:382-497,D:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eD2 D:498-505,D:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eD5 D:506-542,D:597-627,D:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels

Domains in the same PDB:

e4u5eA1 A:6-111,A:244-382 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eA2 A:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eA4 A:383-497,A:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eA3 A:498-505,A:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eA5 A:506-542,A:597-627,A:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5eB2 B:6-111,B:244-383 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eB1 B:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eB4 B:384-497,B:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eB5 B:498-505,B:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eB3 B:506-542,B:597-627,B:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5eC5 C:6-111,C:244-381 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eC3 C:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eC4 C:382-497,C:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eC1 C:498-505,C:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eC2 C:506-542,C:597-627,C:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5eD1 D:6-111,D:244-381 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eD4 D:112-243 Flavodoxin-like Class I glutamine amidotransferase-like Periplasmic binding protein-like I
e4u5eD3 D:382-497,D:731-789 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eD2 D:498-505,D:632-730 Periplasmic binding protein-like II Periplasmic binding protein-like II Periplasmic binding protein-like II
e4u5eD5 D:506-542,D:597-627,D:790-814 Voltage-gated ion channels Voltage-gated ion channels Voltage-gated ion channels
e4u5eE1 E:2-86 con-ikot-ikot toxin con-ikot-ikot toxin con-ikot-ikot toxin
e4u5eF1 F:2-86 con-ikot-ikot toxin con-ikot-ikot toxin con-ikot-ikot toxin

Structural contacts of domain e4u5eD3 of H-group "Periplasmic binding protein-like II":

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The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4u5eC2 D:x,y,z->C:X,Y,Z Voltage-gated ion channels Interaction Interface Pymol
e4u5eC1 D:x,y,z->C:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4u5eA4 D:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4u5eA3 D:x,y,z->A:X,Y,Z Periplasmic binding protein-like II Interaction Interface Pymol
e4u5eE1 D:X,Y,Z->E:x,y,z con-ikot-ikot toxin Interaction Interface Pymol
e4u5eA1 D:x,y,z->A:-X-1,-Y,Z Class I glutamine amidotransferase-like Interaction Interface Pymol