Domain ID e4u6fD81

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  • A: beta barrels
  • X: OB-fold
  • H: Nucleic acid-binding proteins
  • T: Nucleic acid-binding proteins
  • F: Ribosomal_S28e
UID: 001427393
Type: Automatic domain
Parent: e1ny4A1
Range: D8:5-67
PDB: 4u6f
PDB Description: 40S ribosomal protein S28-A
UniProt: Q3E7X9
Hsap BLAST neighbor: P62857
Species:

Structure of domain e4u6fD81

Domains in the same chain:

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e4u6fD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins

Domains in the same PDB:

e4u6fc01 c0:1-98 HTH HTH winged
e4u6fC01 C0:1-96 HTH HTH winged
e4u6fc11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fC11 C1:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fc21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fC21 C2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fc31 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u6fc32 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u6fC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4u6fC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4u6fc41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u6fC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u6fc51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u6fC51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4u6fc61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u6fC61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u6fc71 c7:2-122 HTH HTH FF domain
e4u6fC71 C7:2-126 HTH HTH FF domain
e4u6fc81 c8:2-146 HhH/H2TH H2TH H2TH
e4u6fC81 C8:2-146 HhH/H2TH H2TH H2TH
e4u6fc91 c9:2-144 HTH HTH winged
e4u6fC91 C9:2-144 HTH HTH winged
e4u6fd01 d0:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u6fD01 D0:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4u6fd11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u6fD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4u6fd22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u6fd21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u6fD22 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4u6fD21 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4u6fd31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fd41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fd51 d5:37-105 HTH HTH winged
e4u6fD51 D5:36-105 HTH HTH winged
e4u6fd61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fd71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fd81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fd91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fD91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fe01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u6fE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4u6fe11 e1:77-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fE11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fl22 l2:99-253 SH3 SH3 SH3
e4u6fl21 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fL22 L2:99-253 SH3 SH3 SH3
e4u6fL21 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fl31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u6fL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4u6fl43 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u6fl42 l4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u6fL42 L4:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4u6fL43 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4u6fl51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u6fL51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4u6fl61 l6:2-176 SH3 SH3 SH3
e4u6fL61 L6:2-109,L6:129-176 SH3 SH3 SH3
e4u6fl71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u6fL71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4u6fl81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fL81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fl91 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u6fl92 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u6fL92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u6fL91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4u6fm01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u6fM01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4u6fm11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u6fM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4u6fm31 m3:7-193 RPL13 RPL13 RPL13
e4u6fM31 M3:7-190 RPL13 RPL13 RPL13
e4u6fm41 m4:2-138 SH3 SH3 SH3
e4u6fM41 M4:3-138 SH3 SH3 SH3
e4u6fm51 m5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fM51 M5:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fm61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u6fM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4u6fm71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u6fM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4u6fm81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u6fM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u6fm91 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u6fm92 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u6fM92 M9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4u6fM91 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4u6fn02 n0:1-69 GP2-like RplX-like RplX-like
e4u6fn01 n0:70-172 GP2-like RplX-like RplX-like
e4u6fN02 N0:1-69 GP2-like RplX-like RplX-like
e4u6fN01 N0:70-172 GP2-like RplX-like RplX-like
e4u6fn11 n1:2-160 SH3 SH3 SH3
e4u6fN11 N1:2-160 SH3 SH3 SH3
e4u6fn21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u6fN21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4u6fn31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u6fN31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u6fn41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fN41 N4:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4u6fn51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fN51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4u6fn61 n6:2-127 SH3 SH3 SH3
e4u6fN61 N6:2-127 SH3 SH3 SH3
e4u6fn71 n7:2-136 SH3 SH3 SH3
e4u6fN71 N7:2-136 SH3 SH3 SH3
e4u6fn81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u6fN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4u6fn91 n9:2-47 RPL29 RPL29 RPL29
e4u6fN91 N9:2-47 RPL29 RPL29 RPL29
e4u6fo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4u6fo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u6fO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4u6fo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u6fO21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4u6fo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u6fO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4u6fo41 o4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u6fO41 O4:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4u6fo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u6fO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4u6fo61 o6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u6fO61 O6:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4u6fo71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fO71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fo81 o8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u6fO81 O8:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4u6fo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u6fO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4u6fp01 p0:3-107,p0:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e4u6fq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u6fQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4u6fq21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4u6fs01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u6fS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4u6fs12 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u6fs11 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u6fS12 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4u6fS11 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4u6fs22 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u6fs23 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u6fs21 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u6fS23 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4u6fS22 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4u6fS21 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4u6fs32 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u6fs31 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u6fS31 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4u6fS32 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4u6fs41 s4:176-261 SH3 SH3 SH3
e4u6fs42 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fs43 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u6fS41 S4:176-261 SH3 SH3 SH3
e4u6fS42 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4u6fS43 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u6fs51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u6fS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4u6fs61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u6fS61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4u6fs71 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u6fs72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u6fS72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u6fS71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4u6fs81 s8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u6fS81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4u6fs91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u6fS91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4u6fsM1 sM:23-85,sM:119-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u6fSM1 SM:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4u6fsR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e4u6fSR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed