Domain ID e4ujdBB3

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  • A: a/b three-layered sandwiches
  • X: P-loop domains-like
  • H: P-loop domains-related
  • T: P-loop containing nucleoside triphosphate hydrolases
  • F: GTP_EFTU
UID: 001427644
Type: Automatic domain
Parent: e2c78A3
Range: BB:808-1066
Ligands: GNP MG
PDB: 4ujd
PDB Description: EIF5B
UniProt: G1TRL5
Hsap BLAST neighbor: O60841
Species: Oryctolagus cuniculus

Structure of domain e4ujdBB3

Domains in the same chain:

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e4ujdBB3 BB:808-1066 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ujdBB4 BB:1067-1188 cradle loop barrel RIFT-related Alanine racemase-C
e4ujdBB2 BB:1189-1301 Initiation factor IF2/eIF5b, domain 3 Initiation factor IF2/eIF5b, domain 3 Initiation factor IF2/eIF5b, domain 3
e4ujdBB1 BB:1302-1433 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e4ujdAa1 Aa:2-148 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ujdAA1 AA:2-96 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ujdAA2 AA:97-248 SH3 SH3 SH3
e4ujdAb1 Ab:2-50 RPL29 RPL29 RPL29
e4ujdAB1 AB:2-397 cradle loop barrel RIFT-related Alanine racemase-C
e4ujdAc1 Ac:7-110 Bacillus chorismate mutase-like L30e-like L30e-like
e4ujdAC2 AC:298-366 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4ujdAC1 AC:3-297 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ujdAd1 Ad:17-125 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4ujdAD1 AD:8-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ujdAe1 Ae:5-132 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4ujdAE1 AE:131-288 SH3 SH3 SH3
e4ujdAf1 Af:4-110 cradle loop barrel RIFT-related Alanine racemase-C
e4ujdAF1 AF:15-248 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ujdAg1 Ag:3-103 Glucocorticoid receptor-like RPL34 RPL34
e4ujdAG1 AG:29-263 Bacillus chorismate mutase-like L30e-like L30e-like
e4ujdAh1 Ah:2-123 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ujdAH2 AH:1-87 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ujdAH1 AH:88-192 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ujdAi1 Ai:6-102 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4ujdAI1 AI:3-214 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4ujdAj1 Aj:2-86 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdAJ1 AJ:9-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ujdAk1 Ak:2-61 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4ujdAl1 Al:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4ujdAL1 AL:16-193 RPL13 RPL13 RPL13
e4ujdAm1 Am:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdAM1 AM:2-141 SH3 SH3 SH3
e4ujdAn1 An:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4ujdAN1 AN:1-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ujdAo1 Ao:1-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdAO1 AO:5-200 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ujdAp1 Ap:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdAP1 AP:2-154 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ujdAQ1 AQ:5-188 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ujdAR1 AR:57-183 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4ujdAR2 AR:1-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4ujdAS1 AS:4-72 GP2-like RplX-like RplX-like
e4ujdAS2 AS:73-176 GP2-like RplX-like RplX-like
e4ujdAt1 At:2-131 RPL28 RPL28 RPL28
e4ujdAT1 AT:2-160 SH3 SH3 SH3
e4ujdAu1 Au:1-50,Au:147-210 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e4ujdAu2 Au:51-146 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e4ujdAU1 AU:16-117 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4ujdAV1 AV:13-140 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ujdAW1 AW:1-64 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ujdAX1 AX:38-156 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ujdAY1 AY:1-128 SH3 SH3 SH3
e4ujdAZ1 AZ:1-136 SH3 SH3 SH3
e4ujdBB3 BB:808-1066 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e4ujdBB2 BB:1189-1301 Initiation factor IF2/eIF5b, domain 3 Initiation factor IF2/eIF5b, domain 3 Initiation factor IF2/eIF5b, domain 3
e4ujdBB1 BB:1302-1433 cradle loop barrel RIFT-related Alanine racemase-C
e4ujdBB4 BB:1067-1188 cradle loop barrel RIFT-related Alanine racemase-C
e4ujdCa1 Ca:2-97 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ujdCA1 CA:2-219 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4ujdCb1 Cb:4-83 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdCB2 CB:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4ujdCB1 CB:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4ujdCc1 Cc:8-69 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ujdCC2 CC:202-278 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ujdCC3 CC:135-201 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4ujdCC1 CC:57-134 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4ujdCd1 Cd:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ujdCD1 CD:92-213 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4ujdCD2 CD:2-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4ujdCe1 Ce:6-56 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4ujdCE3 CE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ujdCE2 CE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ujdCE1 CE:176-258 SH3 SH3 SH3
e4ujdCf1 Cf:91-151 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ujdCF1 CF:17-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4ujdCg1 Cg:2-315 beta-propeller-like beta-propeller 7-bladed
e4ujdCG1 CG:1-232 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ujdCH2 CH:4-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4ujdCH1 CH:108-194 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4ujdCI1 CI:2-208 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ujdCJ1 CJ:2-180 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ujdCK1 CK:2-95 HTH HTH winged
e4ujdCL1 CL:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ujdCM1 CM:11-130 Bacillus chorismate mutase-like L30e-like L30e-like
e4ujdCN2 CN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4ujdCN1 CN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4ujdCO1 CO:15-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ujdCP1 CP:12-129 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4ujdCQ1 CQ:8-146 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ujdCR1 CR:2-122 HTH HTH FF domain
e4ujdCS1 CS:2-143 HhH/H2TH H2TH H2TH
e4ujdCT1 CT:2-144 HTH HTH winged
e4ujdCU1 CU:18-118 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4ujdCV1 CV:1-83 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4ujdCW2 CW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4ujdCW1 CW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4ujdCX1 CX:7-140 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ujdCY1 CY:4-125 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ujdCZ1 CZ:40-115 HTH HTH winged