ECOD: domain e4v3pSD2

Domain ID e4v3pSD2

A: beta barrels
X: OB-fold
H: Nucleic acid-binding proteins
T: Nucleic acid-binding proteins
F: Ribosomal_S4e

UID:	001548872
Type:	Automatic domain
Parent:	e3kbgA7
Range:	SD:117-175
PDB:	4v3p
PDB Description:	40S ribosomal protein S4
Hsap BLAST neighbor:	P62701
Species:	Triticum aestivum

Domains in the same chain:

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e4v3pSD3	SD:43-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v3pSD2	SD:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pSD1	SD:176-242	SH3	SH3	SH3

Domains in the same PDB:

e4v3pLa1	La:1-99	SH3	SH3	SH3
e4v3pLA2	LA:1-56,LA:153-216	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e4v3pLA1	LA:57-152	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e4v3pLB2	LB:98-255	SH3	SH3	SH3
e4v3pLB1	LB:1-97	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pLc1	Lc:1-124	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v3pLC1	LC:1-389	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v3pLD1	LD:1-269	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4v3pLD2	LD:303-405	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4v3pLe1	Le:1-244	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v3pLE1	LE:1-170	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v3pLf1	Lf:1-112	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v3pLF2	LF:1-86	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v3pLF1	LF:87-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v3pLg1	Lg:1-120	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v3pLG1	LG:1-219	SH3	SH3	SH3
e4v3pLh1	Lh:1-133	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v3pLH1	LH:58-258	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v3pLi1	Li:3-105	Glucocorticoid receptor-like	RPL34	RPL34
e4v3pLI1	LI:1-184	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v3pLj1	Lj:1-104	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v3pLJ1	LJ:12-75	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e4v3pLJ2	LJ:76-139	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4v3pLk1	Lk:36-112	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v3pLK1	LK:1-206	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v3pLl1	Ll:1-94	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v3pLm1	Lm:1-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v3pLM1	LM:1-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v3pLn1	Ln:2-69	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v3pLN1	LN:1-134	SH3	SH3	SH3
e4v3pLo1	Lo:1-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v3pLO1	LO:1-144	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v3pLp1	Lp:13-53	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v3pLP1	LP:1-194	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v3pLq1	Lq:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e4v3pLQ1	LQ:1-304	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v3pLr1	Lr:1-105	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v3pLR1	LR:1-140	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v3pLs1	Ls:1-112,Ls:186-262	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e4v3pLs2	Ls:113-185	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)
e4v3pLS2	LS:72-167	GP2-like	RplX-like	RplX-like
e4v3pLS1	LS:1-71	GP2-like	RplX-like	RplX-like
e4v3pLT2	LT:56-189	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v3pLT1	LT:1-55	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v3pLU1	LU:1-164	SH3	SH3	SH3
e4v3pLv1	Lv:1-59	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2
e4v3pLV1	LV:1-171	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v3pLw1	Lw:1-59	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2	60S acidic ribosomal protein P1/P2
e4v3pLW1	LW:14-121	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v3pLX1	LX:31-152	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v3pLY1	LY:1-130	SH3	SH3	SH3
e4v3pLZ1	LZ:1-75	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v3pSa1	Sa:1-380	beta-propeller-like	beta-propeller	7-bladed
e4v3pSA1	SA:1-260	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4v3pSB1	SB:12-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4v3pSB2	SB:92-219	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4v3pSC1	SC:1-195	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v3pSD2	SD:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pSD3	SD:43-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v3pSD1	SD:176-242	SH3	SH3	SH3
e4v3pSE2	SE:1-117	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4v3pSE4	SE:118-184	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4v3pSE3	SE:185-263	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v3pSF1	SF:10-200	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4v3pSH2	SH:1-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4v3pSH1	SH:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4v3pSI1	SI:24-149	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v3pSJ1	SJ:1-128	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4v3pSK1	SK:32-150	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v3pSL1	SL:1-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pSM1	SM:1-152	HhH/H2TH	H2TH	H2TH
e4v3pSN1	SN:9-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v3pSO1	SO:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4v3pSO2	SO:31-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e4v3pSP1	SP:40-124	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pSQ1	SQ:1-141	HTH	HTH	FF domain
e4v3pSR1	SR:58-148	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4v3pSS1	SS:1-146	HTH	HTH	winged
e4v3pST1	ST:1-82	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e4v3pSU1	SU:5-102	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v3pSV1	SV:9-108	HTH	HTH	winged
e4v3pSX1	SX:33-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v3pSY1	SY:1-58	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v3pSZ1	SZ:1-62	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)