ECOD: domain e4v5yB61

Domain ID e4v5yB61

A: a+b two layers
X: RRF/tRNA synthetase additional domain-like
H: Ribosome recycling factor, RRF
T: Ribosome recycling factor, RRF
F: RRF

UID:	001434064
Type:	Automatic domain
Parent:	e1dd5A1
Range:	B6:1-185
PDB:	4v5y
PDB Description:	50S ribosomal protein RRF
UniProt:	Q9WX76
Hsap BLAST neighbor:	Q96E11
Species:	Thermus thermophilus

Domains in the same chain:

Download Pymol

e4v5yB61	B6:1-185	RRF/tRNA synthetase additional domain-like	Ribosome recycling factor, RRF	Ribosome recycling factor, RRF

Domains in the same PDB:

e4v5yAB1	AB:8-118,AB:143-225	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4v5yAC1	AC:105-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4v5yAC2	AC:1-104	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4v5yAD1	AD:1-205	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v5yAE1	AE:78-158	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v5yAE2	AE:9-77	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4v5yAF1	AF:1-100	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4v5yAG1	AG:2-151	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4v5yAH2	AH:1-65	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4v5yAH1	AH:66-129	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4v5yAI1	AI:3-129	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v5yAJ1	AJ:5-102	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4v5yAK1	AK:12-128	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v5yAL1	AL:1-123	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yAM1	AM:1-114	HhH/H2TH	H2TH	H2TH
e4v5yAN1	AN:1-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v5yAO1	AO:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4v5yAP1	AP:1-82	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4v5yAQ1	AQ:3-82	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yAR1	AR:19-73	HTH	HTH	tri-helical
e4v5yAS1	AS:2-80	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4v5yAT1	AT:2-86	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e4v5yAU1	AU:3-53	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21
e4v5yB01	B0:1-56	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v5yB11	B1:3-52	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v5yB21	B2:1-46	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4v5yB31	B3:1-64	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4v5yB41	B4:1-38	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4v5yB61	B6:1-185	RRF/tRNA synthetase additional domain-like	Ribosome recycling factor, RRF	Ribosome recycling factor, RRF
e4v5yBC2	BC:125-271	SH3	SH3	SH3
e4v5yBC1	BC:1-124	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yBD1	BD:1-209	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v5yBE1	BE:1-201	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4v5yBF1	BF:1-178	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v5yBG1	BG:1-81	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v5yBG2	BG:82-176	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v5yBH1	BH:56-149	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain
e4v5yBH2	BH:1-55	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e4v5yBI2	BI:72-141	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4v5yBI1	BI:1-71	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e4v5yBJ1	BJ:1-142	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v5yBK1	BK:2-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v5yBL1	BL:2-144	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v5yBM1	BM:1-136	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v5yBN1	BN:1-120	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4v5yBO1	BO:2-117	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v5yBP1	BP:1-114	SH3	SH3	SH3
e4v5yBQ1	BQ:1-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4v5yBR1	BR:1-103	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4v5yBS1	BS:1-110	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v5yBT1	BT:1-93	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v5yBU1	BU:1-102	SH3	SH3	SH3
e4v5yBV1	BV:1-94	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4v5yBW1	BW:6-84	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4v5yBX1	BX:1-63	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v5yBY1	BY:1-58	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v5yBZ1	BZ:2-78	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28
e4v5yCB1	CB:8-118,CB:143-225	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4v5yCC1	CC:105-206	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4v5yCC2	CC:1-104	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4v5yCD1	CD:1-205	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v5yCE2	CE:9-77	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4v5yCE1	CE:78-158	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v5yCF1	CF:1-100	Alpha-beta plaits	Ribosomal protein S6	Ribosomal protein S6
e4v5yCG1	CG:2-153	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4v5yCH1	CH:66-129	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4v5yCH2	CH:1-65	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4v5yCI1	CI:3-129	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v5yCJ1	CJ:5-102	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4v5yCK1	CK:12-128	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v5yCL1	CL:1-123	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yCM1	CM:1-113	HhH/H2TH	H2TH	H2TH
e4v5yCN1	CN:1-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v5yCO1	CO:2-89	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4v5yCP1	CP:1-80	Ribosomal protein S16	Ribosomal protein S16	Ribosomal protein S16
e4v5yCQ1	CQ:3-83	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yCR1	CR:19-73	HTH	HTH	tri-helical
e4v5yCS1	CS:1-80	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4v5yCT1	CT:2-86	Spectrin repeat-like	Ribosomal protein S20	Ribosomal protein S20
e4v5yCU1	CU:3-53	30S ribosomal protein S21	30S ribosomal protein S21	30S ribosomal protein S21
e4v5yD01	D0:1-56	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v5yD11	D1:3-52	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v5yD21	D2:1-46	50S ribosomal protein L34	50S ribosomal protein L34	50S ribosomal protein L34
e4v5yD31	D3:1-64	Ribosomal protein L35p	Ribosomal protein L35p	Ribosomal protein L35p
e4v5yD41	D4:1-38	Ribosomal protein L36	Ribosomal protein L36	Ribosomal protein L36
e4v5yD61	D6:1-185	RRF/tRNA synthetase additional domain-like	Ribosome recycling factor, RRF	Ribosome recycling factor, RRF
e4v5yDC1	DC:1-124	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v5yDC2	DC:125-271	SH3	SH3	SH3
e4v5yDD1	DD:1-209	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v5yDE1	DE:1-201	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4v5yDF1	DF:1-178	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v5yDG1	DG:1-81	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v5yDG2	DG:82-176	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v5yDH2	DH:1-55	L9 N-domain-like	L9 N-domain-like	L9 N-domain-like
e4v5yDH3	DH:56-149	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain	Ribosomal protein L9 C-domain
e4v5yDI2	DI:72-141	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4v5yDI1	DI:1-71	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e4v5yDJ1	DJ:1-142	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v5yDK1	DK:2-122	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v5yDL1	DL:2-144	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v5yDM1	DM:1-136	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v5yDN1	DN:1-120	Enolase-N/ribosomal protein	Prokaryotic ribosomal protein L17	Prokaryotic ribosomal protein L17
e4v5yDO1	DO:2-117	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v5yDP1	DP:1-114	SH3	SH3	SH3
e4v5yDQ1	DQ:1-117	PABP domain-like	Ribosomal protein L20	Ribosomal protein L20
e4v5yDR1	DR:1-103	Ribosomal protein L21p	Ribosomal protein L21p	Ribosomal protein L21p
e4v5yDS1	DS:1-110	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v5yDT1	DT:1-93	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v5yDU1	DU:1-102	SH3	SH3	SH3
e4v5yDV1	DV:1-94	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4v5yDW1	DW:6-84	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal L27 protein
e4v5yDX1	DX:1-63	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v5yDY1	DY:1-58	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v5yDZ1	DZ:2-78	Ribosomal protein bL28-related	Ribosomal protein bL28-related	Ribosomal protein L28