Domain ID e4v6dDM1

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  • A: a+b complex topology
  • X: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • H: alpha/beta-Hammerhead/Barrel-sandwich hybrid
  • T: Ribosomal protein L10e
  • F: Ribosomal_L16
UID: 001955400
Type: Automatic domain
Parent: e3j9zLI1
Range: DM:1-136
PDB: 4v6d
PDB Description: 50S ribosomal protein L16
UniProt: P0ADY7
Hsap BLAST neighbor: Q9NX20
Species:

Structure of domain e4v6dDM1

Domains in the same chain:

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e4v6dDM1 DM:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e

Domains in the same PDB:

e4v6dAB1 AB:8-118,AB:143-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v6dAC2 AC:1-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v6dAC1 AC:105-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v6dAD1 AD:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v6dAE2 AE:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v6dAE1 AE:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v6dAF1 AF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v6dAG1 AG:1-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v6dAH2 AH:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v6dAH1 AH:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v6dAI1 AI:3-129 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v6dAJ1 AJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v6dAK1 AK:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v6dAL1 AL:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dAM1 AM:1-114 HhH/H2TH H2TH H2TH
e4v6dAN1 AN:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v6dAO1 AO:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v6dAP1 AP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v6dAQ1 AQ:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dAR1 AR:19-73 HTH HTH tri-helical
e4v6dAS1 AS:2-80 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v6dAT1 AT:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v6dAU1 AU:3-53 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e4v6dB01 B0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v6dB11 B1:3-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v6dB21 B2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v6dB31 B3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v6dB41 B4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v6dBC2 BC:125-271 SH3 SH3 SH3
e4v6dBC1 BC:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dBD1 BD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e4v6dBE1 BE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v6dBF1 BF:1-177 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v6dBG1 BG:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v6dBG2 BG:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v6dBH3 BH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v6dBH2 BH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v6dBI1 BI:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v6dBI2 BI:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v6dBJ1 BJ:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v6dBK1 BK:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v6dBL1 BL:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v6dBM1 BM:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v6dBN1 BN:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v6dBO1 BO:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v6dBP1 BP:1-114 SH3 SH3 SH3
e4v6dBQ1 BQ:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v6dBR1 BR:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v6dBS1 BS:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v6dBT1 BT:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v6dBU1 BU:1-102 SH3 SH3 SH3
e4v6dBV1 BV:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v6dBW1 BW:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v6dBX1 BX:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v6dBY1 BY:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v6dBZ1 BZ:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v6dCB1 CB:8-118,CB:143-225 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v6dCC2 CC:1-104 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v6dCC1 CC:105-206 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v6dCD1 CD:1-205 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v6dCE2 CE:9-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v6dCE1 CE:78-158 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v6dCF1 CF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4v6dCG1 CG:2-151 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v6dCH2 CH:1-65 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v6dCH1 CH:66-129 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v6dCI1 CI:3-129 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v6dCJ1 CJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v6dCK1 CK:12-128 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v6dCL1 CL:1-123 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dCM1 CM:1-113 HhH/H2TH H2TH H2TH
e4v6dCN1 CN:1-100 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v6dCO1 CO:1-88 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v6dCP1 CP:1-80 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4v6dCQ1 CQ:3-82 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dCR1 CR:19-73 HTH HTH tri-helical
e4v6dCS1 CS:2-80 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v6dCT1 CT:2-86 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4v6dCU1 CU:3-53 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e4v6dD01 D0:1-56 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v6dD11 D1:3-52 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v6dD21 D2:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4v6dD31 D3:1-64 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4v6dD41 D4:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4v6dDC1 DC:1-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v6dDC2 DC:125-271 SH3 SH3 SH3
e4v6dDD1 DD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e4v6dDE1 DE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v6dDF1 DF:1-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v6dDG2 DG:82-176 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v6dDG1 DG:1-81 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v6dDH2 DH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4v6dDH3 DH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4v6dDI1 DI:1-71 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4v6dDI2 DI:72-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4v6dDJ1 DJ:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v6dDK1 DK:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v6dDL1 DL:2-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v6dDM1 DM:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v6dDN1 DN:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4v6dDO1 DO:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v6dDP1 DP:1-114 SH3 SH3 SH3
e4v6dDQ1 DQ:1-117 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4v6dDR1 DR:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4v6dDS1 DS:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v6dDT1 DT:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v6dDU1 DU:1-102 SH3 SH3 SH3
e4v6dDV1 DV:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v6dDW1 DW:6-84 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4v6dDX1 DX:1-77 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4v6dDY1 DY:1-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v6dDZ1 DZ:1-58 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e