ECOD: domain e4v6wCm1

Domain ID e4v6wCm1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L40e

UID:	001436980
Type:	Automatic domain
Parent:	e2ayjA1
Range:	Cm:77-128
PDB:	4v6w
PDB Description:	60S ribosomal protein L40
UniProt:	P18101
Hsap BLAST neighbor:	P62987
Species:	Drosophila melanogaster

Domains in the same chain:

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e4v6wCm1	Cm:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4v6wAa1	Aa:2-108	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v6wAA1	AA:6-223	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e4v6wAb1	Ab:1-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wAB2	AB:17-116	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e4v6wAB1	AB:117-236	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e4v6wAc1	Ac:4-65	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v6wAC1	AC:38-117	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4v6wAC3	AC:185-264	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v6wAC2	AC:118-184	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e4v6wAd1	Ad:5-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v6wAD2	AD:3-101	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e4v6wAD1	AD:94-229	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e4v6wAe1	Ae:74-131	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e4v6wAE3	AE:176-261	SH3	SH3	SH3
e4v6wAE1	AE:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v6wAE2	AE:1-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v6wAf1	Af:77-156	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wAF1	AF:39-228	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e4v6wAg1	Ag:1-318	beta-propeller-like	beta-propeller	7-bladed
e4v6wAG1	AG:1-231	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e4v6wAH2	AH:1-109	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4v6wAH1	AH:110-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e4v6wAI1	AI:2-208	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v6wAJ1	AJ:4-184	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e4v6wAK1	AK:1-95	HTH	HTH	winged
e4v6wAL1	AL:1-155	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v6wAM1	AM:21-139	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v6wAN1	AN:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e4v6wAN2	AN:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain
e4v6wAO1	AO:18-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v6wAP1	AP:8-131	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e4v6wAQ1	AQ:1-148	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v6wAR1	AR:1-120	HTH	HTH	FF domain
e4v6wAS1	AS:6-142	HhH/H2TH	H2TH	H2TH
e4v6wAT1	AT:1-154	HTH	HTH	winged
e4v6wAU1	AU:18-119	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e4v6wAV1	AV:1-82	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e4v6wAW2	AW:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e4v6wAW1	AW:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e4v6wAX1	AX:1-143	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v6wAY1	AY:4-129	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v6wAz1	Az:710-823	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4v6wAz4	Az:328-465	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v6wAz3	Az:545-709	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e4v6wAz5	Az:466-544	Alpha-beta plaits	EF-G C-terminal domain-like	EF-G C-terminal domain-like
e4v6wAz2	Az:4-327	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e4v6wAZ1	AZ:40-113	HTH	HTH	winged
e4v6wCa1	Ca:1-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v6wCA2	CA:97-253	SH3	SH3	SH3
e4v6wCA1	CA:1-96	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v6wCb1	Cb:2-56	RPL29	RPL29	RPL29
e4v6wCB1	CB:1-414	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v6wCc1	Cc:10-109	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v6wCC2	CC:2-300	Ribosomal protein L4	Ribosomal protein L4	Ribosomal protein L4
e4v6wCC3	CC:301-393	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)	C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4v6wCd1	Cd:14-124	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v6wCD1	CD:8-297	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v6wCe1	Ce:1-132	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v6wCE1	CE:16-243	SH3	SH3	SH3
e4v6wCf1	Cf:1-157	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v6wCF1	CF:24-252	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v6wCg1	Cg:3-102	Glucocorticoid receptor-like	RPL34	RPL34
e4v6wCG1	CG:31-271	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v6wCh1	Ch:1-123	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v6wCH1	CH:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v6wCH2	CH:86-190	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v6wCi1	Ci:1-113	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v6wCI1	CI:2-218	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v6wCj1	Cj:2-93	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wCJ1	CJ:1-113,CJ:133-182	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v6wCk1	Ck:2-61	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v6wCK1	CK:74-163	HTH	HTH	Ribosomal protein L11, C-terminal domain
e4v6wCK2	CK:6-73	Ribosomal protein L11/L12e N-terminal domain-like	Ribosomal protein L11/L12e N-terminal domain	Ribosomal protein L11/L12e N-terminal domain
e4v6wCl1	Cl:2-51	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v6wCL1	CL:3-193	RPL13	RPL13	RPL13
e4v6wCm1	Cm:77-128	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wCM1	CM:1-136	SH3	SH3	SH3
e4v6wCn1	Cn:1-25	Ribosomal protein L41-A	Ribosomal protein L41-A	Ribosomal protein L41-A
e4v6wCN1	CN:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v6wCo1	Co:1-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wCO1	CO:1-205	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v6wCp1	Cp:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v6wCP1	CP:2-186	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v6wCq3	Cq:5-109,Cq:183-199	Alpha-beta plaits	Ribosomal protein L10-like	Ribosomal protein L10-like
e4v6wCq2	Cq:109-183	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)	Insertion domain in 60S ribosomal protein rpP0 (L10P)
e4v6wCQ1	CQ:2-188	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v6wCr1	Cr:5-117	RPL28	RPL28	RPL28
e4v6wCR2	CR:57-203	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v6wCR1	CR:1-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v6wCS2	CS:5-72	GP2-like	RplX-like	RplX-like
e4v6wCS1	CS:73-177	GP2-like	RplX-like	RplX-like
e4v6wCT1	CT:2-159	SH3	SH3	SH3
e4v6wCU1	CU:184-299	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v6wCV1	CV:7-140	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v6wCW1	CW:1-130	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v6wCX1	CX:158-277	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v6wCY1	CY:2-132	SH3	SH3	SH3
e4v6wCz1	Cz:1-57,Cz:154-217	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1	a+b domain in Ribosomal protein L1
e4v6wCz2	Cz:58-153	Flavodoxin-like	Rossmann-like domain in Ribosomal protein L1	Rossmann-like domain in Ribosomal protein L1
e4v6wCZ1	CZ:2-135	SH3	SH3	SH3