Domain ID e4v88Ba1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L13/L15p/L18e/L32e
  • H: Ribosomal proteins L15p and L18e
  • T: Ribosomal proteins L15p and L18e
  • F: Ribosomal_L27A
UID: 002321791
Type: Automatic domain
Parent: e1vqoL1
Range: Ba:2-149
Ligands: MG OHX
PDB: 4v88
PDB Description: 60S ribosomal protein L28
UniProt: P02406
Hsap BLAST neighbor: P46776
Species:

Structure of domain e4v88Ba1

Domains in the same chain:

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e4v88Ba1 Ba:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e

Domains in the same PDB:

e4v88Aa1 Aa:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88AA1 AA:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v88Ab1 Ab:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88AB1 AB:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4v88AB2 AB:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4v88Ac1 Ac:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88AC3 AC:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v88AC2 AC:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v88AC1 AC:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4v88Ad1 Ad:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88AD1 AD:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v88AD2 AD:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v88Ae1 Ae:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4v88AE3 AE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v88AE1 AE:176-261 SH3 SH3 SH3
e4v88AE2 AE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88Af1 Af:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88AF1 AF:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v88Ag1 Ag:2-319 beta-propeller-like beta-propeller 7-bladed
e4v88AG1 AG:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v88Ah1 Ah:9-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4v88AH1 AH:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4v88AH2 AH:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4v88AI1 AI:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v88AJ1 AJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v88AK1 AK:1-96 HTH HTH winged
e4v88AL1 AL:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88AM1 AM:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88AN1 AN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v88AN2 AN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4v88AO1 AO:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v88AP1 AP:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v88AQ1 AQ:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v88AR1 AR:2-126 HTH HTH FF domain
e4v88AS1 AS:2-146 HhH/H2TH H2TH H2TH
e4v88AT1 AT:2-144 HTH HTH winged
e4v88AU1 AU:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v88AV1 AV:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4v88AW1 AW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v88AW2 AW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v88AX1 AX:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88AY1 AY:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88AZ1 AZ:36-105 HTH HTH winged
e4v88Ba1 Ba:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v88BA1 BA:99-253 SH3 SH3 SH3
e4v88BA2 BA:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88Bb1 Bb:2-47 RPL29 RPL29 RPL29
e4v88BB1 BB:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4v88Bc1 Bc:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88BC2 BC:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v88BC3 BC:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4v88Bd1 Bd:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4v88BD1 BD:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v88Be1 Be:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4v88BE1 BE:2-109,BE:129-176 SH3 SH3 SH3
e4v88Bf1 Bf:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4v88BF1 BF:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v88Bg1 Bg:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4v88BG1 BG:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88Bh1 Bh:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v88BH2 BH:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v88BH1 BH:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v88Bi1 Bi:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4v88BI1 BI:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v88Bj1 Bj:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88BJ1 BJ:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v88Bk1 Bk:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v88Bl1 Bl:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4v88BL1 BL:7-190 RPL13 RPL13 RPL13
e4v88Bm1 Bm:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88BM1 BM:3-138 SH3 SH3 SH3
e4v88Bn1 Bn:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4v88BN1 BN:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88Bo1 Bo:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88BO1 BO:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v88Bp1 Bp:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88BP1 BP:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v88BQ1 BQ:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v88BR2 BR:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4v88BR1 BR:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4v88BS1 BS:70-172 GP2-like RplX-like RplX-like
e4v88BS2 BS:1-69 GP2-like RplX-like RplX-like
e4v88BT1 BT:2-160 SH3 SH3 SH3
e4v88BU1 BU:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4v88BV1 BV:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v88BW1 BW:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88BX1 BX:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88BY1 BY:2-127 SH3 SH3 SH3
e4v88BZ1 BZ:2-136 SH3 SH3 SH3
e4v88Ca1 Ca:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88CA1 CA:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4v88Cb1 Cb:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88CB2 CB:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4v88CB1 CB:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4v88Cc1 Cc:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88CC3 CC:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4v88CC2 CC:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v88CC1 CC:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e4v88Cd1 Cd:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88CD2 CD:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4v88CD1 CD:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4v88Ce1 Ce:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e4v88CE1 CE:176-261 SH3 SH3 SH3
e4v88CE3 CE:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v88CE2 CE:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88Cf1 Cf:102-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88CF1 CF:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4v88Cg1 Cg:2-319 beta-propeller-like beta-propeller 7-bladed
e4v88CG1 CG:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4v88Ch1 Ch:23-85,Ch:119-174 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e4v88CH2 CH:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4v88CH1 CH:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4v88CI1 CI:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v88CJ1 CJ:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4v88CK1 CK:1-98 HTH HTH winged
e4v88CL1 CL:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88CM1 CM:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88CN1 CN:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4v88CN2 CN:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4v88CO1 CO:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v88CP1 CP:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4v88CQ1 CQ:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4v88CR1 CR:2-122 HTH HTH FF domain
e4v88CS1 CS:2-146 HhH/H2TH H2TH H2TH
e4v88CT1 CT:2-144 HTH HTH winged
e4v88CU1 CU:12-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4v88CV1 CV:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4v88CW2 CW:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4v88CW1 CW:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4v88CX1 CX:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88CY1 CY:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88CZ1 CZ:37-105 HTH HTH winged
e4v88Da1 Da:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v88DA1 DA:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4v88DA2 DA:99-253 SH3 SH3 SH3
e4v88Db1 Db:2-47 RPL29 RPL29 RPL29
e4v88DB1 DB:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e4v88Dc1 Dc:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88DC2 DC:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4v88DC3 DC:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e4v88Dd1 Dd:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e4v88DD1 DD:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4v88De1 De:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e4v88DE1 DE:2-176 SH3 SH3 SH3
e4v88Df1 Df:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e4v88DF1 DF:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4v88Dg1 Dg:2-103 Glucocorticoid receptor-like RPL34 RPL34
e4v88DG1 DG:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e4v88Dh1 Dh:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4v88DH1 DH:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v88DH2 DH:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4v88Di1 Di:2-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e4v88DI1 DI:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4v88Dj1 Dj:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88DJ1 DJ:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4v88Dk1 Dk:3-73 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v88Dl1 Dl:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e4v88DL1 DL:7-193 RPL13 RPL13 RPL13
e4v88Dm1 Dm:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88DM1 DM:2-138 SH3 SH3 SH3
e4v88Dn1 Dn:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e4v88DN1 DN:2-204 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88Do1 Do:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88DO1 DO:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4v88Dp1 Dp:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4v88DP1 DP:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4v88Dq1 Dq:3-107,Dq:184-221 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e4v88DQ1 DQ:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4v88DR1 DR:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e4v88DR2 DR:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e4v88DS1 DS:70-172 GP2-like RplX-like RplX-like
e4v88DS2 DS:1-69 GP2-like RplX-like RplX-like
e4v88DT1 DT:2-160 SH3 SH3 SH3
e4v88DU1 DU:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e4v88DV1 DV:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4v88DW1 DW:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4v88DX1 DX:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4v88DY1 DY:2-127 SH3 SH3 SH3
e4v88DZ1 DZ:2-136 SH3 SH3 SH3