ECOD: domain e4v8pHK1

Domain ID e4v8pHK1

A: few secondary structure elements
X: Rubredoxin-like
H: Rubredoxin-related
T: Rubredoxin-related
F: Ribosomal_L40e

UID:	001442632
Type:	Automatic domain
Parent:	e2ayjA1
Range:	HK:78-129
Ligands:	MG ZN
PDB:	4v8p
PDB Description:	UBIQUITIN-60S RIBOSOMAL PROTEIN L40
UniProt:	P0DJ25
Hsap BLAST neighbor:	P62987
Species:	Tetrahymena thermophila

Domains in the same chain:

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e4v8pHK1	HK:78-129	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related

Domains in the same PDB:

e4v8pAA1	AA:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pAB1	AB:2-52	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v8pAC1	AC:2-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pAE1	AE:2-191	SH3	SH3	SH3
e4v8pAF1	AF:2-126	SH3	SH3	SH3
e4v8pAG1	AG:8-103	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pAH1	AH:7-113	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pAJ1	AJ:0-225	Pentein	Pentein	Pentein
e4v8pAK1	AK:78-129	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pAL1	AL:2-109	Glucocorticoid receptor-like	RPL34	RPL34
e4v8pAM1	AM:12-111	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v8pAN1	AN:2-144	SH3	SH3	SH3
e4v8pAO1	AO:1-134	RPL28	RPL28	RPL28
e4v8pAP1	AP:2-77	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v8pAQ1	AQ:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v8pAT1	AT:2-66	RPL29	RPL29	RPL29
e4v8pAU1	AU:1-203	RPL13	RPL13	RPL13
e4v8pAX1	AX:83-189	GP2-like	RplX-like	RplX-like
e4v8pAX2	AX:2-82	GP2-like	RplX-like	RplX-like
e4v8pBA1	BA:2-97	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8pBA2	BA:98-258	SH3	SH3	SH3
e4v8pBB1	BB:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pBD1	BD:4-172	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v8pBE1	BE:86-186	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pBE2	BE:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pBF1	BF:19-249	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pBH1	BH:2-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v8pBI1	BI:1-198	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v8pBJ1	BJ:4-141	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8pBK1	BK:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pBL1	BL:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pBM1	BM:4-301	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8pBN1	BN:2-181	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pBO1	BO:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v8pBO2	BO:57-185	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v8pBP1	BP:2-97	SH3	SH3	SH3
e4v8pBQ1	BQ:2-158	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v8pBR1	BR:30-150	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pBS1	BS:2-127	SH3	SH3	SH3
e4v8pBT1	BT:2-62	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8pBU1	BU:2-124	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v8pBV1	BV:6-239	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v8pBW1	BW:2-111	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v8pBX1	BX:3-127	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v8pBY1	BY:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pCA2	CA:2-97	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8pCA1	CA:98-258	SH3	SH3	SH3
e4v8pCB1	CB:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pCD1	CD:4-172	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v8pCE1	CE:86-186	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pCE2	CE:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pCF1	CF:19-249	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pCH1	CH:2-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v8pCI1	CI:1-198	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v8pCJ1	CJ:4-141	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8pCK1	CK:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pCL1	CL:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pCM1	CM:2-301	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8pCN1	CN:2-181	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pCO2	CO:2-57	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v8pCO1	CO:57-147	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v8pCP1	CP:2-97	SH3	SH3	SH3
e4v8pCQ1	CQ:2-158	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v8pCR1	CR:30-150	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pCS1	CS:2-127	SH3	SH3	SH3
e4v8pCT1	CT:2-62	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8pCU1	CU:2-124	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v8pCV1	CV:6-239	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v8pCW1	CW:2-111	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v8pCX1	CX:3-127	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v8pCY1	CY:2-103	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pDA1	DA:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pDB1	DB:2-52	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v8pDC1	DC:2-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pDE1	DE:2-191	SH3	SH3	SH3
e4v8pDF1	DF:2-126	SH3	SH3	SH3
e4v8pDG1	DG:8-103	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pDH1	DH:7-113	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pDJ1	DJ:0-225	Pentein	Pentein	Pentein
e4v8pDK1	DK:78-129	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pDL1	DL:2-109	Glucocorticoid receptor-like	RPL34	RPL34
e4v8pDM1	DM:12-111	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v8pDN1	DN:2-144	SH3	SH3	SH3
e4v8pDO1	DO:1-134	RPL28	RPL28	RPL28
e4v8pDP1	DP:2-77	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v8pDQ1	DQ:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v8pDT1	DT:2-66	RPL29	RPL29	RPL29
e4v8pDU1	DU:1-203	RPL13	RPL13	RPL13
e4v8pDX2	DX:2-82	GP2-like	RplX-like	RplX-like
e4v8pDX1	DX:83-189	GP2-like	RplX-like	RplX-like
e4v8pEA1	EA:98-258	SH3	SH3	SH3
e4v8pEA2	EA:2-97	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8pEB1	EB:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pED1	ED:4-172	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v8pEE1	EE:86-186	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pEE2	EE:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pEF1	EF:19-249	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pEH1	EH:2-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v8pEI1	EI:1-198	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v8pEJ1	EJ:4-141	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8pEK1	EK:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pEL1	EL:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pEM1	EM:2-301	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8pEN1	EN:2-181	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pEO2	EO:57-147	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v8pEO1	EO:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v8pEP1	EP:2-97	SH3	SH3	SH3
e4v8pEQ1	EQ:2-158	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v8pER1	ER:30-150	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pES1	ES:2-127	SH3	SH3	SH3
e4v8pET1	ET:2-62	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8pEU1	EU:2-124	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v8pEV1	EV:6-239	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v8pEW1	EW:2-111	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v8pEX1	EX:3-127	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v8pEY1	EY:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pFA1	FA:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pFB1	FB:2-52	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v8pFC1	FC:2-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pFE1	FE:2-191	SH3	SH3	SH3
e4v8pFF1	FF:2-126	SH3	SH3	SH3
e4v8pFG1	FG:8-103	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pFH1	FH:7-113	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pFJ1	FJ:0-225	Pentein	Pentein	Pentein
e4v8pFK1	FK:78-129	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pFL1	FL:2-109	Glucocorticoid receptor-like	RPL34	RPL34
e4v8pFM1	FM:12-111	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v8pFN1	FN:2-144	SH3	SH3	SH3
e4v8pFO1	FO:1-134	RPL28	RPL28	RPL28
e4v8pFP1	FP:2-77	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v8pFQ1	FQ:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v8pFT1	FT:2-66	RPL29	RPL29	RPL29
e4v8pFU1	FU:1-203	RPL13	RPL13	RPL13
e4v8pFX2	FX:2-82	GP2-like	RplX-like	RplX-like
e4v8pFX1	FX:83-189	GP2-like	RplX-like	RplX-like
e4v8pGA1	GA:2-97	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e4v8pGA2	GA:98-258	SH3	SH3	SH3
e4v8pGB1	GB:2-387	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pGD1	GD:4-172	Ribosomal protein L5	Ribosomal protein L5	Ribosomal protein L5
e4v8pGE2	GE:1-85	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pGE1	GE:86-186	Ribosomal protein L6	Ribosomal protein L6	Ribosomal protein L6
e4v8pGF1	GF:19-249	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pGH1	GH:2-213	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Ribosomal protein L10e
e4v8pGI1	GI:1-198	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L13 and L16-A	Ribosomal protein L13 and L16-A
e4v8pGJ1	GJ:4-141	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e4v8pGK1	GK:2-149	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pGL1	GL:2-204	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pGM1	GM:2-301	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e4v8pGN1	GN:2-181	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal proteins L15p and L18e	Ribosomal proteins L15p and L18e
e4v8pGO2	GO:57-154	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain	Ribosomal protein L19 (L19e) C-terminal domain
e4v8pGO1	GO:2-56	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain	Ribosomal protein L19 (L19e) N-terminal domain
e4v8pGP1	GP:2-100	SH3	SH3	SH3
e4v8pGQ1	GQ:2-158	Enolase-N/ribosomal protein	Ribosomal protein L22	Ribosomal protein L22
e4v8pGR1	GR:30-150	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e4v8pGS1	GS:2-127	SH3	SH3	SH3
e4v8pGT1	GT:2-62	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e4v8pGU1	GU:2-124	Long alpha-hairpin	Ribosomal protein L29 (L29p)	Ribosomal protein L29 (L29p)
e4v8pGV1	GV:6-239	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e	Ribosomal protein L30p/L7e
e4v8pGW1	GW:2-111	Ribosomal protein L31e-like	Ribosomal protein L31e/gp120 outer domain	Ribosomal protein L31e/gp120 outer domain
e4v8pGX1	GX:3-127	Ribosomal protein L13/L15p/L18e/L32e	Ribosomal protein L32e	Ribosomal protein L32e
e4v8pGY1	GY:2-82	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pHA1	HA:2-92	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pHB1	HB:2-52	Ribosomal protein L39e	Ribosomal protein L39e	Ribosomal protein L39e
e4v8pHC1	HC:2-104	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pHE1	HE:2-191	SH3	SH3	SH3
e4v8pHF1	HF:2-126	SH3	SH3	SH3
e4v8pHG1	HG:8-103	Bacillus chorismate mutase-like	L30e-like	L30e-like
e4v8pHH1	HH:7-113	cradle loop barrel	RIFT-related	Alanine racemase-C
e4v8pHJ1	HJ:0-225	Pentein	Pentein	Pentein
e4v8pHK1	HK:78-129	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e4v8pHL1	HL:2-109	Glucocorticoid receptor-like	RPL34	RPL34
e4v8pHM1	HM:12-111	Ribosomal protein L22e	Ribosomal protein L22e	Ribosomal protein L22e
e4v8pHN1	HN:2-144	SH3	SH3	SH3
e4v8pHO1	HO:1-134	RPL28	RPL28	RPL28
e4v8pHP1	HP:2-77	SRP9/14-like	Signal recognition particle alu RNA binding heterodimer SRP9/14-related	Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e4v8pHQ1	HQ:2-103	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)	60S ribosomal protein rpL36 (L36e)
e4v8pHT1	HT:2-66	RPL29	RPL29	RPL29
e4v8pHU1	HU:1-203	RPL13	RPL13	RPL13
e4v8pHX1	HX:83-189	GP2-like	RplX-like	RplX-like
e4v8pHX2	HX:2-82	GP2-like	RplX-like	RplX-like