Domain ID e4w23f1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_S27
UID: 001348110
Type: Automatic domain
Parent: e3j43Y1
Range: f:82-152
PDB: 4w23
PDB Description:
Hsap BLAST neighbor: P62979
Species:

Structure of domain e4w23f1

Domains in the same chain:

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e4w23f1 f:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e4w23a1 a:2-99 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4w23b1 b:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4w23B1 B:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e4w23B2 B:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e4w23c1 c:5-68 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4w23C3 C:202-276 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4w23d1 d:5-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4w23D2 D:1-99 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4w23D1 D:92-227 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4w23E1 E:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4w23E2 E:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4w23E3 E:176-263 SH3 SH3 SH3
e4w23f1 f:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4w23F1 F:14-204 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4w23g1 g:2-314 beta-propeller-like beta-propeller 7-bladed
e4w23G1 G:1-237 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4w23H2 H:5-107 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4w23H1 H:108-193 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e4w23I1 I:2-207 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4w23K1 K:1-98 HTH HTH winged
e4w23M1 M:9-132 Bacillus chorismate mutase-like L30e-like L30e-like
e4w23N2 N:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e4w23N1 N:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4w23O1 O:16-151 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4w23R1 R:1-129 HTH HTH FF domain
e4w23T1 T:4-144 HTH HTH winged
e4w23U1 U:16-119 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4w23V1 V:1-82 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e4w23W2 W:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4w23W1 W:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4w23X1 X:2-142 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4w23Y1 Y:3-128 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4w23Z1 Z:41-115 HTH HTH winged

Structural contacts of domain e4w23f1 of H-group "Rubredoxin-related":

The domain and its neighboring domains (both within the asymmetric unit and to crystallographic symmetry mates) are represented by spheres and linked by lines. Distances between the center of the domain and interfaces are shown for each contact.

Domain IDSymmetry operatorH-groupVisualization
e4w23M1 f:x,y,z->M:X,Y,Z L30e-like Interaction Interface Pymol