Domain ID e4ybbCE1

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  • A: a/b three-layered sandwiches
  • X: Ribosomal protein L4
  • H: Ribosomal protein L4
  • T: Ribosomal protein L4
  • F: Ribosomal_L4
UID: 001513264
Type: Automatic domain
Parent: e1dmgA1
Range: CE:1-201
Ligands: MG
PDB: 4ybb
PDB Description: 50S ribosomal protein L4
UniProt: P60723
Hsap BLAST neighbor: Q9BYD3
Species:

Structure of domain e4ybbCE1

Domains in the same chain:

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e4ybbCE1 CE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4

Domains in the same PDB:

e4ybbAB1 AB:4-119,AB:144-227 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4ybbAC1 AC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4ybbAC2 AC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4ybbAD1 AD:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ybbAE1 AE:10-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4ybbAE2 AE:77-164 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ybbAF1 AF:1-106 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4ybbAG1 AG:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4ybbAH2 AH:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4ybbAH1 AH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4ybbAI1 AI:4-130 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ybbAJ1 AJ:4-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4ybbAK1 AK:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ybbAL1 AL:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbAM1 AM:2-115 HhH/H2TH H2TH H2TH
e4ybbAN1 AN:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ybbAO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4ybbAP1 AP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4ybbAQ1 AQ:4-83 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbAR1 AR:20-74 HTH HTH tri-helical
e4ybbAS1 AS:3-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4ybbAT1 AT:2-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4ybbAU1 AU:2-57 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e4ybbBB1 BB:4-119,BB:144-227 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e4ybbBC2 BC:2-106 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e4ybbBC1 BC:107-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e4ybbBD1 BD:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e4ybbBE2 BE:78-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ybbBE1 BE:10-77 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e4ybbBF1 BF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e4ybbBG1 BG:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e4ybbBH1 BH:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e4ybbBH2 BH:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e4ybbBI1 BI:4-130 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e4ybbBJ1 BJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e4ybbBK1 BK:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ybbBL1 BL:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbBM1 BM:2-115 HhH/H2TH H2TH H2TH
e4ybbBN1 BN:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e4ybbBO1 BO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e4ybbBP1 BP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e4ybbBQ1 BQ:4-83 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbBR1 BR:20-74 HTH HTH tri-helical
e4ybbBS1 BS:3-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e4ybbBT1 BT:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e4ybbBU1 BU:2-57 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e4ybbC01 C0:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ybbC11 C1:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ybbC21 C2:4-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ybbC31 C3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ybbC41 C4:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ybbC51 C5:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ybbCC1 CC:126-272 SH3 SH3 SH3
e4ybbCC2 CC:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbCD1 CD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e4ybbCE1 CE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ybbCF1 CF:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ybbCG2 CG:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ybbCG1 CG:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ybbCH1 CH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ybbCH2 CH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ybbCJ1 CJ:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4ybbCJ2 CJ:8-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4ybbCK1 CK:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ybbCL1 CL:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ybbCM1 CM:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ybbCN1 CN:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4ybbCO1 CO:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ybbCP1 CP:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ybbCQ1 CQ:2-115 SH3 SH3 SH3
e4ybbCR1 CR:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ybbCS1 CS:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ybbCT1 CT:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ybbCU1 CU:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ybbCV1 CV:2-103 SH3 SH3 SH3
e4ybbCW1 CW:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ybbCX1 CX:11-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ybbCY1 CY:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ybbCZ1 CZ:2-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e4ybbD01 D0:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e4ybbD11 D1:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ybbD21 D2:4-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e4ybbD31 D3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e4ybbD41 D4:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e4ybbD51 D5:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e4ybbDC2 DC:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e4ybbDC1 DC:126-272 SH3 SH3 SH3
e4ybbDD1 DD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e4ybbDE1 DE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e4ybbDF1 DF:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e4ybbDG2 DG:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ybbDG1 DG:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e4ybbDH2 DH:1-54 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e4ybbDH3 DH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e4ybbDI1 DI:2-136 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e4ybbDJ2 DJ:8-74 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e4ybbDJ1 DJ:75-141 HTH HTH Ribosomal protein L11, C-terminal domain
e4ybbDK1 DK:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e4ybbDL1 DL:1-123 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e4ybbDM1 DM:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e4ybbDN1 DN:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e4ybbDO1 DO:1-125 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e4ybbDP1 DP:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e4ybbDQ1 DQ:2-115 SH3 SH3 SH3
e4ybbDR1 DR:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e4ybbDS1 DS:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e4ybbDT1 DT:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e4ybbDU1 DU:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e4ybbDV1 DV:2-103 SH3 SH3 SH3
e4ybbDW1 DW:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e4ybbDX1 DX:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e4ybbDY1 DY:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e4ybbDZ1 DZ:2-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)