Domain ID e5dm6B1

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 001951914
Type: Automatic domain
Parent: e1vw3C1
Range: B:1-205
Ligands: MG
PDB: 5dm6
PDB Description: 50S ribosomal protein L3
UniProt: Q9RXK2
Hsap BLAST neighbor: P09001
Species: Deinococcus radiodurans

Structure of domain e5dm6B1

Domains in the same chain:

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e5dm6B1 B:1-205 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e5dm601 0:1-59,0:152-224 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1 a+b domain in Ribosomal protein L1
e5dm602 0:60-151 Flavodoxin-like Rossmann-like domain in Ribosomal protein L1 Rossmann-like domain in Ribosomal protein L1
e5dm611 1:0-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5dm621 2:1-47 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5dm631 3:2-66 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5dm6A2 A:2-127 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5dm6A1 A:128-275 SH3 SH3 SH3
e5dm6B1 B:1-205 cradle loop barrel RIFT-related Alanine racemase-C
e5dm6C1 C:2-198 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5dm6D1 D:3-179 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5dm6E2 E:5-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dm6E1 E:83-175 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5dm6F2 F:1-70 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e5dm6F1 F:71-144 HTH HTH Ribosomal protein L11, C-terminal domain
e5dm6G1 G:30-171 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5dm6H1 H:1-134 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5dm6I1 I:4-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5dm6J1 J:6-141 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5dm6K1 K:3-115 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5dm6L1 L:8-111 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5dm6M1 M:2-110 SH3 SH3 SH3
e5dm6N1 N:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5dm6O1 O:5-98 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5dm6P1 P:8-134 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5dm6Q1 Q:2-94 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5dm6R1 R:4-113 SH3 SH3 SH3
e5dm6S1 S:1-88 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5dm6S2 S:89-175 Ribosomal protein TL5/L25 C-terminal domain-like Ribosomal protein TL5/L25 C-terminal domain-related Ribosomal protein TL5/L25 C-terminal domain-related
e5dm6T1 T:2-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5dm6U1 U:8-79 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5dm6V1 V:1-66 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5dm6W1 W:1-55 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5dm6Z1 Z:3-59 Rubredoxin-like Rubredoxin-related Rubredoxin-related