Domain ID e5gpnZ3

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  • A: a+b two layers
  • X: FAD-linked reductases, C-terminal domain-like
  • H: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • T: Ni-Fe binding domain in nickel-iron hydrogenase large subunit
  • F: Complex1_49kDa
UID: 002056177
Type: Automatic domain
Parent: e2fug42
Range: Z:89-118,Z:433-463
PDB: 5gpn
PDB Description: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2
UniProt: F1S1A8
Hsap BLAST neighbor: O75306
Species: Sus scrofa

Structure of domain e5gpnZ3

Domains in the same chain:

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e5gpnZ3 Z:89-118,Z:433-463 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e5gpnZ2 Z:119-161,Z:360-432 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e5gpnZ1 Z:162-359 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit

Domains in the same PDB:

e5gpn01 0:1-261 Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like Cytochrome c oxidase subunit III-like
e5gpn11 1:4-147 Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV Mitochondrial cytochrome c oxidase subunit IV
e5gpn21 2:1-109 Repetitive alpha hairpins Cytochrome c oxidase subunit E Cytochrome c oxidase subunit E
e5gpn31 3:1-98 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e5gpn41 4:1-84 Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa Mitochondrial cytochrome c oxidase subunit VIa
e5gpn51 5:11-85 Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h Cytochrome c oxidase subunit h
e5gpn61 6:1-73 Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc Mitochondrial cytochrome c oxidase subunit VIc
e5gpn71 7:1-56 Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa Mitochondrial cytochrome c oxidase subunit VIIa
e5gpn81 8:6-54 Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb Mitochondrial cytochrome c oxidase subunit VIIb
e5gpn91 9:1-47 Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)
e5gpna1 a:61-207 Flavodoxin-like Class I glutamine amidotransferase-like CheY-like
e5gpnA2 A:1-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnA1 A:234-446 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnAa1 Aa:74-154 ACP-like Acyl-carrier protein (ACP) Acyl-carrier protein (ACP)
e5gpnAc1 Ac:1-55 Mitochondrial complex I, MWFE subunit Mitochondrial complex I, MWFE subunit Mitochondrial complex I, MWFE subunit
e5gpnAe1 Ae:11-98 FATC domain FATC domain FATC domain
e5gpnAf1 Af:24-113 LYR protein LYR protein LYR protein
e5gpnAj1 Aj:29-161 Mitochondrial complex I, PDSW subunit Mitochondrial complex I, PDSW subunit Mitochondrial complex I, PDSW subunit
e5gpnAk1 Ak:10-160 LYR protein LYR protein LYR protein
e5gpnAl1 Al:5-100 Mitochondrial complex I, B14.5b subunit Mitochondrial complex I, B14.5b subunit Mitochondrial complex I, B14.5b subunit
e5gpnAm1 Am:46-72 Mitochondrial complex I, KFYI subunit Mitochondrial complex I, KFYI subunit Mitochondrial complex I, KFYI subunit
e5gpnb1 b:64-212 4Fe-4S ferredoxin 4Fe-4S ferredoxin 4Fe-4S ferredoxin
e5gpnB1 B:21-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnB2 B:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnc1 c:47-273 Nqo1 FMN-binding domain-like Nqo1 FMN-binding domain-like Nqo1 FMN-binding domain-like
e5gpnc2 c:274-359 beta-Grasp Ubiquitin-related Nqo1 middle domain-like
e5gpnc3 c:360-456 Bromodomain-like Nqo1C-terminal domain-like Nqo1C-terminal domain-like
e5gpnC2 C:1-260 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e5gpnC1 C:261-379 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnd2 d:48-126 NQO2 helical bundle domain NQO2 helical bundle domain NQO2 helical bundle domain
e5gpnd1 d:127-216 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e5gpnD2 D:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e5gpnD1 D:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e5gpne1 e:1-315 Sodium/proton antiporter subunits-like Sodium/proton antiporter subunits-like NADH-quinone oxidoreductase subunit 8 (Nqo8)-related
e5gpnE1 E:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e5gpnE2 E:70-196 ISP domain ISP domain ISP domain
e5gpnf1 f:2-347 Sodium/proton antiporter subunits-like Sodium/proton antiporter subunits-like NADH-quinone oxidoreductase subunit L (NuoL)-related
e5gpnF1 F:5-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpng1 g:4-109 NADH-quinone oxidoreductase subunit A NADH-quinone oxidoreductase subunit A NADH-quinone oxidoreductase subunit A
e5gpnG1 G:1-81 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnh1 h:2-458 Sodium/proton antiporter subunits-like Sodium/proton antiporter subunits-like NADH-quinone oxidoreductase subunit L (NuoL)-related
e5gpnH1 H:15-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpni1 i:1-90 NADH-quinone oxidoreductase subunit K NADH-quinone oxidoreductase subunit K NADH-quinone oxidoreductase subunit K
e5gpnI1 I:46-78 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e5gpnj1 j:5-598 Sodium/proton antiporter subunits-like Sodium/proton antiporter subunits-like NADH-quinone oxidoreductase subunit L (NuoL)-related
e5gpnJ1 J:1-62 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnk1 k:2-106,k:137-173 NADH-quinone oxidoreductase subunit J NADH-quinone oxidoreductase subunit J NADH-quinone oxidoreductase subunit J
e5gpnK1 K:2-44 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnL1 L:1-62 Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnm1 m:4-56 Mitochondrial complex I, B9 subunit Mitochondrial complex I, B9 subunit Mitochondrial complex I, B9 subunit
e5gpnM1 M:1-233 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnM2 M:234-446 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnn1 n:14-96 Thioredoxin-like Thioredoxin-like Thioredoxin-like
e5gpnN1 N:21-235 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpnN2 N:236-439 LuxS, MPP, ThrRS/AlaRS common domain LuxS, MPP, ThrRS/AlaRS common domain LuxS/MPP-like metallohydrolase
e5gpno1 o:18-68 cytochrome bc1 complex 11 kDa protein-like CHCH domain CHCH domain
e5gpnO2 O:1-260 Transmembrane heme-binding four-helical bundle Transmembrane heme-binding four-helical bundle Transmembrane di-heme cytochromes
e5gpnO1 O:261-379 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnp1 p:45-287,p:312-358 Rossmann-like Rossmann-related NAD(P)-binding Rossmann-fold domains
e5gpnP1 P:1-195 Cytochrome c-like Cytochrome c Cytochrome c
e5gpnP2 P:196-241 cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor cytochrome c1 transmembrane anchor
e5gpnq1 q:61-256 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5gpnQ1 Q:1-69 iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor iron-sulfur subunit (ISP) transmembrane anchor
e5gpnQ2 Q:70-196 ISP domain ISP domain ISP domain
e5gpnr1 r:30-92 Preprotein translocase subunit YajC Preprotein translocase subunit YajC Preprotein translocase subunit YajC
e5gpnR1 R:5-110 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpns1 s:1-43 Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)
e5gpnS1 S:1-78 Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnt1 t:74-154 ACP-like Acyl-carrier protein (ACP) Acyl-carrier protein (ACP)
e5gpnT1 T:15-78 cytochrome bc1 complex 11 kDa protein-like Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnU1 U:46-78 Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein Ubiquinol-cytochrome c reductase 8 kDa protein
e5gpnV1 V:9-45 Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
e5gpnw1 w:60-166 Putative oxidoreductase Putative oxidoreductase Putative oxidoreductase
e5gpnW1 W:51-219 Nqo5-like Nqo5-like Nqo5-like
e5gpnx1 x:74-119 Rubredoxin-like Rubredoxin-related Cytochrome c oxidase Subunit F
e5gpny1 y:1-514 Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like Cytochrome c oxidase subunit I-like
e5gpnY3 Y:31-104 beta-Grasp Ubiquitin-related Ubiquitin-like
e5gpnY1 Y:105-159 iron-sulfur center-binding helical hairpin iron-sulfur center-binding helical hairpin iron-sulfur center-binding helical hairpin
e5gpnY2 Y:160-240 4Fe-4S ferredoxin 4Fe-4S ferredoxin 4Fe-4S ferredoxin
e5gpnY6 Y:241-300 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1 Formate dehydrogenase/DMSO reductase, domain 1
e5gpnY4 Y:301-370,Y:519-716 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e5gpnY5 Y:371-518 Rossmann-like Formate dehydrogenase/DMSO reductase, domains 2 and 3 Formate dehydrogenase/DMSO reductase, domains 2 and 3
e5gpnz2 z:1-90 Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region Cytochrome c oxidase subunit II-like, transmembrane region
e5gpnz1 z:91-227 Cupredoxin-like Cupredoxin-related Cupredoxin-related
e5gpnZ3 Z:89-118,Z:433-463 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e5gpnZ2 Z:119-161,Z:360-432 FAD-linked reductases, C-terminal domain-like Ni-Fe binding domain in nickel-iron hydrogenase large subunit Ni-Fe binding domain in nickel-iron hydrogenase large subunit
e5gpnZ1 Z:162-359 alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit alpha-helical domain in nickel-iron hydrogenase, large subunit