Domain ID e5j88BD1

Download files:
  • A: a+b two layers
  • X: beta-Grasp
  • H: Ubiquitin-related
  • T: Alpha-L RNA-binding motif
  • F: Ribosomal_S4,S4
UID: 001859858
Type: Automatic domain
Parent: e4v4vAD1
Range: BD:2-206
PDB: 5j88
PDB Description: 30S ribosomal protein S4
UniProt: P0A7V8
Species:

Structure of domain e5j88BD1

Domains in the same chain:

Download Pymol

e5j88BD1 BD:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif

Domains in the same PDB:

e5j88AB1 AB:4-227 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5j88AC2 AC:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5j88AC1 AC:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5j88AD1 AD:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5j88AE2 AE:79-164 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5j88AE1 AE:10-78 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5j88AF1 AF:1-106 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5j88AG1 AG:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5j88AH1 AH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5j88AH2 AH:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5j88AI1 AI:4-130 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5j88AJ1 AJ:4-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5j88AK1 AK:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5j88AL1 AL:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88AM1 AM:2-115 HhH/H2TH H2TH H2TH
e5j88AN1 AN:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5j88AO1 AO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5j88AP1 AP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5j88AQ1 AQ:4-83 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88AR1 AR:20-74 HTH HTH tri-helical
e5j88AS1 AS:3-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5j88AT1 AT:2-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5j88AU1 AU:2-57 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e5j88BB1 BB:4-227 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5j88BC2 BC:2-105 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5j88BC1 BC:106-207 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5j88BD1 BD:2-206 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5j88BE2 BE:77-159 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5j88BE1 BE:10-76 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5j88BF1 BF:1-100 Alpha-beta plaits Ribosomal protein S6 Ribosomal protein S6
e5j88BG1 BG:2-152 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5j88BH1 BH:2-66 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5j88BH2 BH:67-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5j88BI1 BI:4-130 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5j88BJ1 BJ:5-102 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5j88BK1 BK:13-129 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5j88BL1 BL:2-124 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88BM1 BM:2-115 HhH/H2TH H2TH H2TH
e5j88BN1 BN:2-101 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5j88BO1 BO:2-89 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5j88BP1 BP:1-82 Ribosomal protein S16 Ribosomal protein S16 Ribosomal protein S16
e5j88BQ1 BQ:4-83 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88BR1 BR:20-74 HTH HTH tri-helical
e5j88BS1 BS:3-81 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5j88BT1 BT:3-87 Spectrin repeat-like Ribosomal protein S20 Ribosomal protein S20
e5j88BU1 BU:2-57 30S ribosomal protein S21 30S ribosomal protein S21 30S ribosomal protein S21
e5j88C01 C0:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5j88C11 C1:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5j88C21 C2:4-53 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5j88C31 C3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5j88C41 C4:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5j88C51 C5:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5j88CC2 CC:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88CC1 CC:126-272 SH3 SH3 SH3
e5j88CD1 CD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e5j88CE1 CE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5j88CF1 CF:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5j88CG1 CG:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5j88CG2 CG:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5j88CH3 CH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5j88CH2 CH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5j88CJ2 CJ:8-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e5j88CJ1 CJ:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e5j88CK1 CK:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5j88CL1 CL:1-122 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5j88CM1 CM:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5j88CN1 CN:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5j88CO1 CO:1-120 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5j88CP1 CP:2-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5j88CQ1 CQ:2-115 SH3 SH3 SH3
e5j88CR1 CR:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5j88CS1 CS:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5j88CT1 CT:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5j88CU1 CU:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5j88CV1 CV:2-103 SH3 SH3 SH3
e5j88CW1 CW:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5j88CX1 CX:11-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5j88CY1 CY:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5j88CZ1 CZ:2-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5j88D01 D0:2-59 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5j88D11 D1:2-57 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5j88D21 D2:4-54 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5j88D31 D3:1-46 50S ribosomal protein L34 50S ribosomal protein L34 50S ribosomal protein L34
e5j88D41 D4:2-65 Ribosomal protein L35p Ribosomal protein L35p Ribosomal protein L35p
e5j88D51 D5:1-38 Ribosomal protein L36 Ribosomal protein L36 Ribosomal protein L36
e5j88DC2 DC:2-125 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5j88DC1 DC:126-272 SH3 SH3 SH3
e5j88DD1 DD:1-209 cradle loop barrel RIFT-related Alanine racemase-C
e5j88DE1 DE:1-201 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5j88DF1 DF:2-178 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5j88DG1 DG:2-82 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5j88DG2 DG:83-177 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5j88DH1 DH:56-149 Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain Ribosomal protein L9 C-domain
e5j88DH2 DH:1-55 L9 N-domain-like L9 N-domain-like L9 N-domain-like
e5j88DI1 DI:2-136 Alpha-beta plaits Ribosomal protein L10-like Ribosomal protein L10-like
e5j88DJ1 DJ:8-72 Ribosomal protein L11/L12e N-terminal domain-like Ribosomal protein L11/L12e N-terminal domain Ribosomal protein L11/L12e N-terminal domain
e5j88DJ2 DJ:73-141 HTH HTH Ribosomal protein L11, C-terminal domain
e5j88DK1 DK:1-142 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5j88DL1 DL:1-123 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5j88DM1 DM:1-144 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5j88DN1 DN:1-136 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5j88DO1 DO:1-125 Enolase-N/ribosomal protein Prokaryotic ribosomal protein L17 Prokaryotic ribosomal protein L17
e5j88DP1 DP:1-117 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5j88DQ1 DQ:2-115 SH3 SH3 SH3
e5j88DR1 DR:2-118 PABP domain-like Ribosomal protein L20 Ribosomal protein L20
e5j88DS1 DS:1-103 Ribosomal protein L21p Ribosomal protein L21p Ribosomal protein L21p
e5j88DT1 DT:1-110 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5j88DU1 DU:1-93 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5j88DV1 DV:2-103 SH3 SH3 SH3
e5j88DW1 DW:1-94 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5j88DX1 DX:10-85 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal L27 protein
e5j88DY1 DY:2-78 Ribosomal protein bL28-related Ribosomal protein bL28-related Ribosomal protein L28
e5j88DZ1 DZ:2-63 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)