ECOD: domain e5k0yI3

Domain ID e5k0yI3

A: a+b two layers
X: beta-Grasp
H: Ubiquitin-related
T: Alpha-L RNA-binding motif
F: Ribosomal_S4e,RS4NT

UID:	001866495
Type:	Automatic domain
Parent:	e4d5lE1
Range:	I:1-116
PDB:	5k0y
PDB Description:	40S ribosomal protein S4
UniProt:	G1TK17
Hsap BLAST neighbor:	P62701
Species:	Oryctolagus cuniculus

Domains in the same chain:

Download Pymol

e5k0yI3	I:1-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5k0yI2	I:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yI1	I:176-263	SH3	SH3	SH3

Domains in the same PDB:

e5k0ya1	a:2-67	R3H domain-like	Ribosomal protein S8, N-terminal domain	Ribosomal protein S8, N-terminal domain
e5k0ya2	a:68-130	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain	Ribosomal protein S8, C-terminal domain
e5k0yb1	b:1-82	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)	40S ribosomal protein rpS21 (S21e)
e5k0yc3	c:38-119	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)	N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5k0yc1	c:120-186	dsRBD-like	dsRNA-binding domain-like	dsRNA-binding domain-like
e5k0yc2	c:187-263	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5k0ye1	e:1-126	HTH	HTH	FF domain
e5k0yf1	f:2-209	Flavodoxin-like	Ribosomal protein S2/SIS domain	Ribosomal protein S2/SIS domain
e5k0yg1	g:1-99	Alpha-lytic protease prodomain-like	KH-domains	Prokaryotic type KH domain (KH-domain type II)
e5k0yg2	g:92-227	T-fold	Ribosomal protein S3-C	Ribosomal protein S3-C
e5k0yG1	G:1-158	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yh1	h:16-119	Alpha-beta plaits	Ribosomal protein S10	Ribosomal protein S10
e5k0yH1	H:6-146	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like
e5k0yi2	i:19-113	Ribosomal protein L25-like	40S ribosomal protein S3A N-terminal domain	40S ribosomal protein S3A N-terminal domain
e5k0yi1	i:114-233	T-fold	40S ribosomal protein S3A C-terminal domain	40S ribosomal protein S3A C-terminal domain
e5k0yI3	I:1-116	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5k0yI2	I:117-175	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yI1	I:176-263	SH3	SH3	SH3
e5k0yj1	j:16-151	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like
e5k0yJ1	J:4-56	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5k0yk1	k:2-100	Glucocorticoid receptor-like	LIM domain-like	LIM domain-like
e5k0yK1	K:7-188	beta-Grasp	Ubiquitin-related	Alpha-L RNA-binding motif
e5k0yl1	l:5-68	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yL1	L:6-142	HhH/H2TH	H2TH	H2TH
e5k0ym1	m:2-314	beta-propeller-like	beta-propeller	7-bladed
e5k0yn1	n:4-130	Ribosomal protein S19	Ribosomal protein S19	Ribosomal protein S19
e5k0yo1	o:2-207	Ribosomal protein L14-like	Ribosomal protein L14-related	Ribosomal protein L14-related
e5k0yO1	O:239-315	Alpha-beta plaits	RNA-binding domain, RBD	RNA-binding domain, RBD
e5k0yp1	p:82-152	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5k0yP3	P:6-89	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yP1	P:90-185	HhH/H2TH	eIF2alpha middle domain	eIF2alpha middle domain
e5k0yP2	P:186-271	Alpha-beta plaits	eIF-2-alpha, C-terminal domain	eIF-2-alpha, C-terminal domain
e5k0yq1	q:1-237	Ribosomal protein L25-like	Ribosomal protein L25-like	Ribosomal protein L25-like
e5k0yQ1	Q:1-142	OB-fold	Nucleic acid-binding proteins	Nucleic acid-binding proteins
e5k0yr1	r:9-132	Bacillus chorismate mutase-like	L30e-like	L30e-like
e5k0yR1	R:4-144	HTH	HTH	winged
e5k0ys1	s:3-133	Alpha-beta plaits	Ribosomal proteins S24e, L23 and L15e	Ribosomal proteins S24e, L23 and L15e
e5k0yS1	S:52-99,S:142-259	P-loop domains-like	P-loop domains-related	P-loop containing nucleoside triphosphate hydrolases
e5k0yS4	S:100-141	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5k0yS3	S:260-380	cradle loop barrel	RIFT-related	Alanine racemase-C
e5k0yS2	S:381-473	cradle loop barrel	RIFT-related	Aminomethyltransferase beta-barrel domain
e5k0yt1	t:1-98	HTH	HTH	winged
e5k0yT1	T:1-329	beta-propeller-like	beta-propeller	7-bladed
e5k0yU1	U:14-204	Ribosomal protein S7	Ribosomal protein S7	Ribosomal protein S7
e5k0yV1	V:75-133	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)	40S ribosomal protein S30 (S30e)
e5k0yW1	W:41-115	HTH	HTH	winged
e5k0yX2	X:5-107	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5k0yX1	X:108-194	Alpha-lytic protease prodomain-like	40S ribosomal protein S7-A	40S ribosomal protein S7-A
e5k0yY1	Y:1-84	Rubredoxin-like	Rubredoxin-related	Rubredoxin-related
e5k0yZ1	Z:2-82	HTH	40S ribosomal protein S13 N-terminal domain	40S ribosomal protein S13 N-terminal domain
e5k0yZ2	Z:83-151	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain	S15/NS1 RNA-binding domain