Domain ID e5kk5A6

Download files:
  • A: beta barrels
  • X: OB-fold
  • H: Small protein B (SmpB)
  • T: Small protein B (SmpB)
  • F: Unmapped domains
UID: 002417950
Type: Manual domain
Parent: e5b43A1
Range: A:5-48,A:527-597,A:719-793,A:858-885
PDB: 5kk5
PDB Description: CRISPR-associated endonuclease Cpf1
UniProt: U2UMQ6
Species: Acidaminococcus sp. BV3L6

Structure of domain e5kk5A6

Domains in the same chain:

Download Pymol

e5kk5A6 A:5-48,A:527-597,A:719-793,A:858-885 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5kk5A1 A:49-319 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5kk5A2 A:320-526 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5kk5A4 A:598-718 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5kk5A5 A:886-995,A:1008-1072,A:1259-1307 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5kk5A3 A:1073-1258 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e5kk5A6 A:5-48,A:527-597,A:719-793,A:858-885 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5kk5A1 A:49-319 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5kk5A2 A:320-526 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5kk5A4 A:598-718 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5kk5A5 A:886-995,A:1008-1072,A:1259-1307 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5kk5A3 A:1073-1258 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain