Domain ID e5m1jo51

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: Ribosomal_L44
UID: 001945805
Type: Automatic domain
Parent: e1vqo31
Range: o5:2-106
Ligands: MG ZN
PDB: 5m1j
PDB Description: 60S ribosomal protein L42-B
UniProt: P0CX28
Hsap BLAST neighbor: P83881
Species: Saccharomyces cerevisiae

Structure of domain e5m1jo51

Domains in the same chain:

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e5m1jo51 o5:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5m1jA11 A1:136-277 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5m1jA13 A1:1-135 SH3 Dom34/Pelota N-terminal domain-like Dom34/Pelota N-terminal domain-like
e5m1jA12 A1:278-381 Bacillus chorismate mutase-like L30e-like L30e-like
e5m1ja21 a2:2-99 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5m1jA21 A2:2-208 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5m1ja51 a5:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5m1jA51 A5:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m1jA52 A5:99-253 SH3 SH3 SH3
e5m1jA64 A6:12-77,A6:139-147 RuvA-C RuvA-C, UBA, CRAL/TRIO-N, HBS1 RuvA-C, UBA, CRAL/TRIO-N, HBS1
e5m1jA63 A6:148-390 P-loop domains-like P-loop domains-related P-loop containing nucleoside triphosphate hydrolases
e5m1jA62 A6:391-501 cradle loop barrel RIFT-related Alanine racemase-C
e5m1jA61 A6:502-611 cradle loop barrel RIFT-related Aminomethyltransferase beta-barrel domain
e5m1jb21 b2:30-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jB22 B2:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5m1jB21 B2:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5m1jb51 b5:2-59 RPL29 RPL29 RPL29
e5m1jB51 B5:2-366 cradle loop barrel RIFT-related Alanine racemase-C
e5m1jc21 c2:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m1jC21 C2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5m1jC22 C2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5m1jC23 C2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5m1jc51 c5:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5m1jC52 C5:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5m1jC51 C5:2-269 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5m1jd21 d2:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5m1jD22 D2:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5m1jD21 D2:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5m1jd51 d5:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5m1jD51 D5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5m1je21 e2:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5m1jE21 E2:176-261 SH3 SH3 SH3
e5m1jE23 E2:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m1jE22 E2:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5m1je51 e5:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5m1jE51 E5:2-176 SH3 SH3 SH3
e5m1jf21 f2:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jF21 F2:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5m1jf51 f5:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5m1jF51 F5:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5m1jg21 g2:2-319 beta-propeller-like beta-propeller 7-bladed
e5m1jG21 G2:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5m1jg51 g5:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5m1jG51 G5:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e5m1jH21 H2:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5m1jH22 H2:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5m1jh51 h5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5m1jH51 H5:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5m1jH52 H5:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5m1jI21 I2:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5m1ji51 i5:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5m1jI51 I5:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5m1jJ21 J2:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5m1jj51 j5:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jJ51 J5:6-112,J5:132-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5m1jK21 K2:1-74 HTH HTH winged
e5m1jk51 k5:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5m1jK51 K5:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5m1jL21 L2:2-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m1jl51 l5:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5m1jL51 L5:2-194 RPL13 RPL13 RPL13
e5m1jM21 M2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5m1jm51 m5:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jM51 M5:3-138 SH3 SH3 SH3
e5m1jN22 N2:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5m1jN21 N2:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5m1jn51 n5:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5m1jN51 N5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5m1jO21 O2:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5m1jo51 o5:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jP21 P2:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5m1jp51 p5:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m1jP51 P5:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5m1jQ21 Q2:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5m1jQ51 Q5:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5m1jR21 R2:2-126 HTH HTH FF domain
e5m1jR52 R5:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5m1jR51 R5:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5m1jS21 S2:2-66,S2:90-146 HhH/H2TH H2TH H2TH
e5m1jS51 S5:1-69 GP2-like RplX-like RplX-like
e5m1jS52 S5:70-172 GP2-like RplX-like RplX-like
e5m1jT21 T2:2-144 HTH HTH winged
e5m1jT51 T5:2-160 SH3 SH3 SH3
e5m1jU21 U2:15-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5m1jU51 U5:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5m1jV21 V2:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5m1jV51 V5:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5m1jW22 W2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5m1jW21 W2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5m1jW51 W5:1-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5m1jX21 X2:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m1jX51 X5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5m1jY21 Y2:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5m1jY51 Y5:2-127 SH3 SH3 SH3
e5m1jZ21 Z2:36-105 HTH HTH winged
e5m1jZ51 Z5:2-136 SH3 SH3 SH3