Domain ID e5m5xI1

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  • A: few secondary structure elements
  • X: Rubredoxin-like
  • H: Rubredoxin-related
  • T: Rubredoxin-related
  • F: RNA_POL_M_15KD
UID: 001935295
Type: Automatic domain
Parent: e1twfI1
Range: I:2-65
Ligands: ZN
PDB: 5m5x
PDB Description: DNA-directed RNA polymerase I subunit RPA12
UniProt: P32529
Species: Saccharomyces cerevisiae

Structure of domain e5m5xI1

Domains in the same chain:

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e5m5xI1 I:2-65 Rubredoxin-like Rubredoxin-related Rubredoxin-related

Domains in the same PDB:

e5m5xA5 A:1-141,A:172-270,A:312-463 N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit N-terminal domain in RNA-polymerase beta-prime subunit
e5m5xA7 A:464-505,A:581-665 cradle loop barrel RIFT-related double psi
e5m5xA1 A:506-580 MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase
e5m5xA3 A:666-826 first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit first helical domain in RNA-polymerase beta-prime subunit
e5m5xA8 A:827-1053 second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit second helical domain in RNA-polymerase beta-prime subunit
e5m5xA4 A:1054-1180 helical domain in yeast RNA-polymerases third helical domain in yeast RNA-polymerase I RPA190 subunit third helical domain in yeast RNA-polymerase I RPA190 subunit
e5m5xA2 A:1181-1234,A:1545-1663 central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit central helical domain in RNA-polymerase beta-prime subunit
e5m5xA6 A:1235-1261,A:1498-1544 ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5m5xA9 A:1262-1338,A:1438-1497 permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit
e5m5xB4 B:13-209,B:401-547 N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase N-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5m5xB7 B:210-400 insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase insertion domain in beta subunit of DNA dependent RNA-polymerase
e5m5xB3 B:548-646 inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit inserted a+b domain in yeast RNA polymerase beta subunit
e5m5xB2 B:647-761 barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase barrel domain in beta subunit of DNA dependent RNA-polymerase
e5m5xB5 B:762-798,B:912-1040 cradle loop barrel RIFT-related double psi
e5m5xB6 B:799-911 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Single hybrid motif
e5m5xB1 B:1041-1203 C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase C-terminal domain in beta subunit of DNA dependent RNA-polymerase
e5m5xC2 C:30-75,C:222-335 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5m5xC1 C:76-221 Ribosomal protein TL5/L25 C-terminal domain-like Insert subdomain of RNA polymerase alpha subunit Insert subdomain of RNA polymerase alpha subunit
e5m5xD1 D:12-49,D:80-100 HhH/H2TH SAM/DNA-glycosylase SAM domain-like
e5m5xE1 E:2-142 Restriction endonuclease-like Eukaryotic RPB5 N-terminal domain Eukaryotic RPB5 N-terminal domain
e5m5xE2 E:143-215 RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit RPB5-like RNA polymerase subunit
e5m5xF1 F:55-154 RPB6/omega subunit-like RPB6/omega subunit-like RPB6
e5m5xG2 G:8-126 Dodecin subunit-like Flavin-binding protein dodecin-like Flavin-binding protein dodecin-like
e5m5xG1 G:127-174,G:215-251 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m5xH1 H:3-146 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5m5xI1 I:2-65 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m5xJ1 J:1-69 HTH RPB10 RPB10
e5m5xK1 K:43-142 DCoH-like RBP11-like subunits of RNA polymerase RBP11-like subunits of RNA polymerase
e5m5xL1 L:28-70 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5m5xM1 M:8-110 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains
e5m5xN1 N:24-177 triple barrel triple barrel RNA polymerase I subunits A49/A34.5 dimerization domains