Domain ID e5mgaA4

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  • A: beta barrels
  • X: OB-fold
  • H: Small protein B (SmpB)
  • T: Small protein B (SmpB)
  • F: Unmapped domains
UID: 002106765
Type: Automatic domain
Parent: e5b43A1
Range: A:3-46,A:762-892
Ligands: MG
PDB: 5mga
PDB Description: CRISPR-associated endonuclease Cpf1
UniProt: A0Q7Q2
Species:

Structure of domain e5mgaA4

Domains in the same chain:

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e5mgaA4 A:3-46,A:762-892 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5mgaA5 A:47-338 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5mgaA1 A:339-410,A:413-589 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5mgaA7 A:587-661 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5mgaA6 A:660-762 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5mgaA3 A:893-1084,A:1248-1300 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5mgaA2 A:1085-1247 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain

Domains in the same PDB:

e5mgaA4 A:3-46,A:762-892 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5mgaA5 A:47-338 CRISPR-associated endonuclease first helical domain CRISPR-associated endonuclease Cpf1 first helical domain CRISPR-associated endonuclease Cpf1 first helical domain
e5mgaA1 A:339-410,A:413-589 CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain CRISPR-associated endonuclease Cpf1 second helical domain
e5mgaA7 A:587-661 OB-fold Small protein B (SmpB) Small protein B (SmpB)
e5mgaA6 A:660-762 CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain
e5mgaA3 A:893-1084,A:1248-1300 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5mgaA2 A:1085-1247 CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain CRISPR-associated endonuclease Cpf1 nuclease domain