Domain ID e5ndvL61

Download files:
  • A: beta barrels
  • X: SH3
  • H: SH3
  • T: SH3
  • F: Ribosomal_L6e
UID: 002152234
Type: Automatic domain
Parent: e4v3pLG1
Range: L6:2-109,L6:129-176
PDB: 5ndv
PDB Description: 60S ribosomal protein L6-A
UniProt: Q02326
Hsap BLAST neighbor: Q02878
Species:

Structure of domain e5ndvL61

Domains in the same chain:

Download Pymol

e5ndvL61 L6:2-109,L6:129-176 SH3 SH3 SH3

Domains in the same PDB:

e5ndvc01 c0:1-98 HTH HTH winged
e5ndvC01 C0:1-90 HTH HTH winged
e5ndvc11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvC11 C1:5-143 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvc21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvC21 C2:26-140 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvc31 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndvc32 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5ndvC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndvC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5ndvc41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndvC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndvc51 c5:4-138 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndvC51 C5:16-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndvc61 c6:2-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndvC61 C6:5-140 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndvc71 c7:2-122 HTH HTH FF domain
e5ndvC71 C7:2-121 HTH HTH FF domain
e5ndvc81 c8:2-66,c8:90-146 HhH/H2TH H2TH H2TH
e5ndvC81 C8:4-146 HhH/H2TH H2TH H2TH
e5ndvc91 c9:2-144 HTH HTH winged
e5ndvC91 C9:7-143 HTH HTH winged
e5ndvd01 d0:13-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndvD01 D0:17-118 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndvd11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5ndvD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5ndvd21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndvd22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndvD22 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndvD21 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndvd31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvd41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvd51 d5:37-105 HTH HTH winged
e5ndvD51 D5:36-105 HTH HTH winged
e5ndvd61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndvD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndvd71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvd81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvd91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndvD91 D9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndve01 e0:2-63 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5ndvE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5ndvl22 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvl21 l2:99-249 SH3 SH3 SH3
e5ndvL21 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvL22 L2:99-249 SH3 SH3 SH3
e5ndvl31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5ndvL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5ndvl42 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndvl43 l4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndvL42 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndvL43 L4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndvl51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndvL51 L5:2-294 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndvl61 l6:2-176 SH3 SH3 SH3
e5ndvL61 L6:2-109,L6:129-176 SH3 SH3 SH3
e5ndvl71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndvL71 L7:19-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndvl81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvL81 L8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvl92 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndvl91 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndvL92 L9:86-189 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndvL91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndvm01 m0:2-220 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndvM01 M0:2-218 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndvm11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndvM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndvm31 m3:2-195 RPL13 RPL13 RPL13
e5ndvM31 M3:2-194 RPL13 RPL13 RPL13
e5ndvm41 m4:2-138 SH3 SH3 SH3
e5ndvM41 M4:3-138 SH3 SH3 SH3
e5ndvm51 m5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvM51 M5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvm61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndvM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndvm71 m7:2-156 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndvM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndvm81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndvM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndvm92 m9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5ndvm91 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5ndvM91 M9:57-186 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5ndvM92 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5ndvn01 n0:70-172 GP2-like RplX-like RplX-like
e5ndvn02 n0:1-69 GP2-like RplX-like RplX-like
e5ndvN02 N0:70-172 GP2-like RplX-like RplX-like
e5ndvN01 N0:1-69 GP2-like RplX-like RplX-like
e5ndvn11 n1:2-160 SH3 SH3 SH3
e5ndvN11 N1:2-160 SH3 SH3 SH3
e5ndvn21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5ndvN21 N2:10-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5ndvn31 n3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndvN31 N3:6-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndvn41 n4:1-135 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndvN41 N4:1-63 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndvn51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvN51 N5:25-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndvn61 n6:2-124 SH3 SH3 SH3
e5ndvN61 N6:2-126 SH3 SH3 SH3
e5ndvn71 n7:2-136 SH3 SH3 SH3
e5ndvN71 N7:2-136 SH3 SH3 SH3
e5ndvn81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndvN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndvn91 n9:2-59 RPL29 RPL29 RPL29
e5ndvN91 N9:2-57 RPL29 RPL29 RPL29
e5ndvo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndvo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5ndvO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5ndvo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5ndvO21 O2:2-126 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5ndvo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5ndvO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5ndvo41 o4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5ndvO41 O4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5ndvo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndvO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndvo61 o6:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5ndvO61 O6:24-98 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5ndvo71 o7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvO71 O7:2-85 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvo81 o8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndvO81 O8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndvo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5ndvO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5ndvq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5ndvQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5ndvq21 q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndvs01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndvS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndvs12 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5ndvs11 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5ndvS11 S1:21-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5ndvS12 S1:114-231 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5ndvs21 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndvs23 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndvs22 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndvS23 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndvS21 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndvS22 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndvs31 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndvs32 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndvS32 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndvS31 S3:92-211 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndvs41 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndvs43 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvs42 s4:176-261 SH3 SH3 SH3
e5ndvS42 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndvS41 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndvS43 S4:176-259 SH3 SH3 SH3
e5ndvs51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndvS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndvs61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndvS61 S6:1-224 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndvs71 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndvs72 s7:2-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndvS72 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndvS71 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndvs81 s8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndvS81 S8:2-197 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndvs91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndvS91 S9:2-175 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndvsM1 sM:23-85,sM:119-165 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5ndvSM1 SM:9-166 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5ndvsR1 sR:2-319 beta-propeller-like beta-propeller 7-bladed
e5ndvSR1 SR:3-319 beta-propeller-like beta-propeller 7-bladed