Domain ID e5ndwL31

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  • A: beta barrels
  • X: cradle loop barrel
  • H: RIFT-related
  • T: Alanine racemase-C
  • F: Ribosomal_L3
UID: 002152438
Type: Automatic domain
Parent: e1vqoB1
Range: L3:2-387
Ligands: MG
PDB: 5ndw
PDB Description: 60S ribosomal protein L3
UniProt: P14126
Hsap BLAST neighbor: P39023
Species:

Structure of domain e5ndwL31

Domains in the same chain:

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e5ndwL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C

Domains in the same PDB:

e5ndwc01 c0:1-93 HTH HTH winged
e5ndwC01 C0:1-96 HTH HTH winged
e5ndwc11 c1:2-147 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwC11 C1:3-156 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwc21 c2:20-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwC21 C2:25-143 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwc32 c3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndwc31 c3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5ndwC32 C3:2-82 HTH 40S ribosomal protein S13 N-terminal domain 40S ribosomal protein S13 N-terminal domain
e5ndwC31 C3:83-151 S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain S15/NS1 RNA-binding domain
e5ndwc41 c4:10-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndwC41 C4:11-137 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndwc51 c5:9-133 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndwC51 C5:8-131 Ribosomal protein S19 Ribosomal protein S19 Ribosomal protein S19
e5ndwc61 c6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndwC61 C6:3-143 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndwc71 c7:2-122 HTH HTH FF domain
e5ndwC71 C7:2-126 HTH HTH FF domain
e5ndwc81 c8:2-66,c8:90-146 HhH/H2TH H2TH H2TH
e5ndwC81 C8:2-66,C8:90-146 HhH/H2TH H2TH H2TH
e5ndwc91 c9:2-144 HTH HTH winged
e5ndwC91 C9:2-144 HTH HTH winged
e5ndwd01 d0:18-121 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndwD01 D0:15-119 Alpha-beta plaits Ribosomal protein S10 Ribosomal protein S10
e5ndwd11 d1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5ndwD11 D1:1-87 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e) 40S ribosomal protein rpS21 (S21e)
e5ndwd21 d2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndwd22 d2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndwD22 D2:2-67 R3H domain-like Ribosomal protein S8, N-terminal domain Ribosomal protein S8, N-terminal domain
e5ndwD21 D2:68-130 Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain Ribosomal protein S8, C-terminal domain
e5ndwd31 d3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwD31 D3:2-145 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwd41 d4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwD41 D4:2-135 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwd51 d5:37-105 HTH HTH winged
e5ndwD51 D5:36-105 HTH HTH winged
e5ndwd61 d6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwD61 D6:2-98 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwd71 d7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwD71 D7:2-82 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwd81 d8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwD81 D8:5-67 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwd91 d9:4-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwD91 D9:5-56 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwe01 e0:2-62 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5ndwE01 E0:2-61 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e) 40S ribosomal protein S30 (S30e)
e5ndwe11 e1:80-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwE11 E1:82-152 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwl22 l2:99-253 SH3 SH3 SH3
e5ndwl21 l2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwL21 L2:2-98 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndwL22 L2:99-253 SH3 SH3 SH3
e5ndwl31 l3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5ndwL31 L3:2-387 cradle loop barrel RIFT-related Alanine racemase-C
e5ndwl42 l4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndwl43 l4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndwL42 L4:270-362 C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p) C-terminal helical region in 60S ribosomal protein L4 (L4p)
e5ndwL43 L4:2-275 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4
e5ndwl51 l5:4-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndwL51 L5:2-297 Ribonuclease H-like Ribonuclease H-like Ribonuclease H-like
e5ndwl61 l6:2-176 SH3 SH3 SH3
e5ndwL61 L6:2-176 SH3 SH3 SH3
e5ndwl71 l7:22-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndwL71 L7:23-244 Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e
e5ndwl81 l8:24-254 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwL81 L8:24-256 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwl92 l9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndwl91 l9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndwL91 L9:1-85 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndwL92 L9:86-191 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6
e5ndwm01 m0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndwM01 M0:2-221 alpha/beta-Hammerhead/Barrel-sandwich hybrid alpha/beta-Hammerhead/Barrel-sandwich hybrid Ribosomal protein L10e
e5ndwm11 m1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndwM11 M1:6-174 Ribosomal protein L5 Ribosomal protein L5 Ribosomal protein L5
e5ndwm31 m3:2-195 RPL13 RPL13 RPL13
e5ndwM31 M3:2-194 RPL13 RPL13 RPL13
e5ndwm41 m4:2-138 SH3 SH3 SH3
e5ndwM41 M4:3-138 SH3 SH3 SH3
e5ndwm51 m5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwM51 M5:2-175 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwm61 m6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndwM61 M6:3-199 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L13 and L16-A Ribosomal protein L13 and L16-A
e5ndwm71 m7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndwM71 M7:2-184 Enolase-N/ribosomal protein Ribosomal protein L22 Ribosomal protein L22
e5ndwm81 m8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndwM81 M8:2-186 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndwm91 m9:57-185 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5ndwm92 m9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5ndwM92 M9:2-56 Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain Ribosomal protein L19 (L19e) N-terminal domain
e5ndwM91 M9:57-189 Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain Ribosomal protein L19 (L19e) C-terminal domain
e5ndwn01 n0:2-69 GP2-like RplX-like RplX-like
e5ndwn02 n0:70-172 GP2-like RplX-like RplX-like
e5ndwN01 N0:70-172 GP2-like RplX-like RplX-like
e5ndwN02 N0:1-69 GP2-like RplX-like RplX-like
e5ndwn11 n1:2-160 SH3 SH3 SH3
e5ndwN11 N1:2-160 SH3 SH3 SH3
e5ndwn21 n2:11-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5ndwN21 N2:9-108 Ribosomal protein L22e Ribosomal protein L22e Ribosomal protein L22e
e5ndwn31 n3:3-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndwN31 N3:2-137 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndwn41 n4:1-130 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwN41 N4:1-130 Glucocorticoid receptor-like LIM domain-like LIM domain-like
e5ndwn51 n5:23-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwN51 N5:22-142 Alpha-beta plaits Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e
e5ndwn61 n6:2-123 SH3 SH3 SH3
e5ndwN61 N6:2-127 SH3 SH3 SH3
e5ndwn71 n7:2-136 SH3 SH3 SH3
e5ndwN71 N7:2-136 SH3 SH3 SH3
e5ndwn81 n8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndwN81 N8:2-149 Ribosomal protein L13/L15p/L18e/L32e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e
e5ndwn91 n9:2-57 RPL29 RPL29 RPL29
e5ndwN91 N9:2-59 RPL29 RPL29 RPL29
e5ndwo01 o0:6-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwO01 O0:9-105 Bacillus chorismate mutase-like L30e-like L30e-like
e5ndwo11 o1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5ndwO11 O1:4-112 Ribosomal protein L31e-like Ribosomal protein L31e/gp120 outer domain Ribosomal protein L31e/gp120 outer domain
e5ndwo21 o2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5ndwO21 O2:2-128 Ribosomal protein L13/L15p/L18e/L32e Ribosomal protein L32e Ribosomal protein L32e
e5ndwo31 o3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5ndwO31 O3:2-107 cradle loop barrel RIFT-related Alanine racemase-C
e5ndwo41 o4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5ndwO41 O4:2-113 Glucocorticoid receptor-like RPL34 RPL34
e5ndwo51 o5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndwO51 O5:2-120 Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p)
e5ndwo61 o6:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5ndwO61 O6:24-100 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e) 60S ribosomal protein rpL36 (L36e)
e5ndwo71 o7:2-84 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwO71 O7:2-88 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwo81 o8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndwO81 O8:2-78 SRP9/14-like Signal recognition particle alu RNA binding heterodimer SRP9/14-related Signal recognition particle alu RNA binding heterodimer SRP9/14-related
e5ndwo91 o9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5ndwO91 O9:2-51 Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e
e5ndwq01 q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwQ01 Q0:77-128 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwq11 q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5ndwQ11 Q1:1-25 Ribosomal protein L41-A Ribosomal protein L41-A Ribosomal protein L41-A
e5ndwq21 q2:2-105 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwQ21 Q2:2-106 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwq31 q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndwQ31 Q3:2-92 Rubredoxin-like Rubredoxin-related Rubredoxin-related
e5ndws01 s0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndwS01 S0:2-207 Flavodoxin-like Ribosomal protein S2/SIS domain Ribosomal protein S2/SIS domain
e5ndws12 s1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5ndws11 s1:114-235 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5ndwS11 S1:20-113 Ribosomal protein L25-like 40S ribosomal protein S3A N-terminal domain 40S ribosomal protein S3A N-terminal domain
e5ndwS12 S1:114-233 T-fold 40S ribosomal protein S3A C-terminal domain 40S ribosomal protein S3A C-terminal domain
e5ndws22 s2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndws21 s2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndws23 s2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndwS23 S2:176-250 Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like Ribosomal protein S5 domain 2-like
e5ndwS21 S2:109-175 dsRBD-like dsRNA-binding domain-like dsRNA-binding domain-like
e5ndwS22 S2:34-108 N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p) N-terminal region in 40S ribosomal protein rpS2 (S5p)
e5ndws31 s3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndws32 s3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndwS32 S3:3-91 Alpha-lytic protease prodomain-like KH-domains Prokaryotic type KH domain (KH-domain type II)
e5ndwS31 S3:92-225 T-fold Ribosomal protein S3-C Ribosomal protein S3-C
e5ndws41 s4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndws43 s4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndws42 s4:176-261 SH3 SH3 SH3
e5ndwS41 S4:2-116 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndwS42 S4:176-261 SH3 SH3 SH3
e5ndwS43 S4:117-175 OB-fold Nucleic acid-binding proteins Nucleic acid-binding proteins
e5ndws51 s5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndwS51 S5:20-225 Ribosomal protein S7 Ribosomal protein S7 Ribosomal protein S7
e5ndws61 s6:1-218 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndwS61 S6:1-226 Ribosomal protein L25-like Ribosomal protein L25-like Ribosomal protein L25-like
e5ndws71 s7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndws72 s7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndwS71 S7:4-105 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndwS72 S7:106-187 Alpha-lytic protease prodomain-like 40S ribosomal protein S7-A 40S ribosomal protein S7-A
e5ndws81 s8:2-197 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndwS81 S8:2-200 Ribosomal protein L14-like Ribosomal protein L14-related Ribosomal protein L14-related
e5ndws91 s9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndwS91 S9:2-186 beta-Grasp Ubiquitin-related Alpha-L RNA-binding motif
e5ndwsM1 sM:23-168 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5ndwSM1 SM:9-163L,SM:164-176 Suppressor protein STM1 Suppressor protein STM1 Suppressor protein STM1
e5ndwsR1 sR:4-319 beta-propeller-like beta-propeller 7-bladed
e5ndwSR1 SR:2-319 beta-propeller-like beta-propeller 7-bladed